Functional clusters
Information
- Type MapMan
- Description Solute transport.carrier-mediated transport.IT superfamily.phosphate transporter (PHO)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aquilegia oxysepala | CHR03 | 1 | CH_aox_72 | 3 | 3 | 0.0000000964818 |
| Arabidopsis thaliana | Chr2 | 1 | CH_ath_198 | 3 | 9 | 0.0000113704 |
| Amborella trichopoda | AmTr_v1.0_scaffold00010 | 1 | CH_atr_304 | 2 | 2 | 0.000476644 |
| Brassica carinata | ChrC06 | 1 | CH_bca_447 | 3 | 3 | 0.0000067721 |
| Brassica carinata | ChrB08 | 1 | CH_bca_644 | 3 | 5 | 0.0000676793 |
| Brassica carinata | ChrC05 | 1 | CH_bca_728 | 3 | 6 | 0.000135317 |
| Brassica napus | C05 | 1 | CH_bna_173 | 4 | 6 | 0.0000000389797 |
| Brassica napus | A06 | 1 | CH_bna_346 | 3 | 3 | 0.00000683711 |
| Brassica oleracea | C5 | 1 | CH_bol_108 | 4 | 9 | 0.000000166749 |
| Brassica oleracea | C7 | 1 | CH_bol_204 | 3 | 4 | 0.0000147397 |
| Brassica rapa | A06 | 1 | CH_bra_168 | 3 | 4 | 0.0000147037 |
| Camellia sinensis var. sinensis | Chr6 | 1 | CH_camsi_104 | 5 | 10 | 0.0000000000107462 |
| Camellia sinensis var. sinensis | Chr4 | 1 | CH_camsi_442 | 3 | 5 | 0.00000901709 |
| Corylus avellana | 9 | 1 | CH_cav_485 | 2 | 2 | 0.000766695 |
| Coffea canephora | chr11 | 1 | CH_ccan_211 | 2 | 2 | 0.0000638836 |
| Citrus clementina | scaffold_6 | 1 | CH_ccl_174 | 3 | 3 | 0.000000565268 |
| Carpinus fangiana | Cfa03 | 1 | CH_cfa_127 | 3 | 4 | 0.000000688229 |
| Cardamine hirsuta | Chr5 | 1 | CH_chi_157 | 3 | 3 | 0.00000118251 |
| Carya illinoinensis | Chr07 | 1 | CH_cil_163 | 4 | 5 | 0.00000000357486 |
| Corchorus olitorius | AWUE01019720.1 | 1 | CH_col_15 | 4 | 6 | 0.00000000560704 |
| Capsella rubella | scaffold_5 | 1 | CH_cru_182 | 3 | 3 | 0.00000132315 |
| Daucus carota | DCARv2_Chr8 | 1 | CH_dca_148 | 3 | 3 | 0.00000174505 |
| Erigeron canadensis | Conyza_canadensis_scaffold:6 | 1 | CH_eca_183 | 3 | 4 | 0.00000101471 |
| Eucalyptus grandis | Chr09 | 1 | CH_egr_226 | 5 | 8 | 0.00000000000390147 |
| Erythranthe guttata | scaffold_12 | 1 | CH_egut_106 | 4 | 5 | 0.00000000121597 |
| Eutrema salsugineum | scaffold_6 | 1 | CH_esa_112 | 3 | 3 | 0.00000143526 |
| Fragaria vesca | Fvb4 | 1 | CH_fve_202 | 3 | 5 | 0.00000182159 |
| Glycine max | Gm20 | 1 | CH_gma_127 | 4 | 8 | 0.0000000114872 |
| Helianthus annuus | HanXRQChr14 | 1 | CH_han_153 | 4 | 4 | 0.000000000412032 |
| Helianthus annuus | HanXRQChr09 | 1 | CH_han_187 | 6 | 79 | 0.00000000657332 |
| Hydrangea macrophylla | Hma1.2p1_0409F.1 | 1 | CH_hma_52 | 3 | 3 | 0.0000000740453 |
| Magnolia biondii | Chr10 | 1 | CH_mbi_270 | 3 | 9 | 0.0000103959 |
| Malus domestica | Chr00 | 1 | CH_mdo_54 | 5 | 5 | 0.0000000000000310528 |
| Marchantia polymorpha | scaffold_67 | 1 | CH_mpo_18 | 4 | 6 | 0.00000000212127 |
| Medicago truncatula | chr7 | 1 | CH_mtr_182 | 4 | 6 | 0.00000000065531 |
| Nelumbo nucifera | chr4 | 1 | CH_nnu_23 | 6 | 10 | 0.00000000000000127719 |
| Prunus persica | Pp01 | 1 | CH_ppe_191 | 3 | 3 | 0.000000166944 |
| Pisum sativum | chr3LG5 | 1 | CH_psa_114 | 3 | 3 | 0.000000142858 |
| Papaver somniferum | NC_039367.1 | 1 | CH_pso_150 | 6 | 48 | 0.00000000175267 |
| Papaver somniferum | NC_039364.1 | 1 | CH_pso_30 | 10 | 71 | 4.45286e-19 |
| Papaver somniferum | NW_020625486.1 | 1 | CH_pso_380 | 3 | 4 | 0.0000166027 |
| Populus trichocarpa | Chr10 | 1 | CH_ptr_291 | 3 | 8 | 0.0000462588 |
| Quercus lobata | 3 | 1 | CH_qlo_42 | 8 | 13 | 6.54113e-23 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 1 | CH_rch_764 | 2 | 2 | 0.000597979 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 1 | CH_rch_765 | 2 | 2 | 0.000597979 |
| Salix brachista | GWHAAZH00000008 | 1 | CH_sbr_149 | 3 | 3 | 0.0000021681 |
| Salix brachista | GWHAAZH00000010 | 1 | CH_sbr_80 | 4 | 5 | 0.00000000375624 |
| Sequoiadendron giganteum | chr2 | 1 | CH_sgi_665 | 3 | 10 | 0.00000853887 |
| Selenicereus undatus | Scaffold_19641 | 1 | CH_sun_46 | 3 | 3 | 0.000000277212 |
| Trochodendron aralioides | group0 | 1 | CH_tar_181 | 3 | 3 | 0.00000196806 |
| Theobroma cacao | Chromosome_2 | 1 | CH_tca_100 | 4 | 5 | 0.00000000123733 |
| Vaccinium macrocarpon | chr4_Vaccinium_macrocarpon_Stevens_v1 | 1 | CH_vma_137 | 3 | 3 | 0.00000072536 |
| Vigna mungo | CM024069.1 | 1 | CH_vmu_111 | 3 | 3 | 0.00000035071 |
| Vitis vinifera | chr1 | 1 | CH_vvi_101 | 4 | 5 | 0.00000000138607 |
| Aquilegia oxysepala | CHR03 | 2 | CH_aox_72 | 3 | 3 | 0.0000000964818 |
| Arabidopsis thaliana | Chr2 | 2 | CH_ath_198 | 3 | 9 | 0.0000113704 |
| Amborella trichopoda | AmTr_v1.0_scaffold00010 | 2 | CH_atr_304 | 2 | 2 | 0.000476644 |
| Brassica carinata | ChrC06 | 2 | CH_bca_447 | 3 | 3 | 0.0000067721 |
| Brassica carinata | ChrB08 | 2 | CH_bca_644 | 3 | 5 | 0.0000676793 |
| Brassica carinata | ChrC05 | 2 | CH_bca_728 | 3 | 6 | 0.000135317 |
| Brassica oleracea | C5 | 2 | CH_bol_108 | 4 | 9 | 0.000000166749 |
| Brassica oleracea | C7 | 2 | CH_bol_204 | 3 | 4 | 0.0000147397 |
| Brassica rapa | A06 | 2 | CH_bra_168 | 3 | 4 | 0.0000147037 |
| Camellia sinensis var. sinensis | Chr6 | 2 | CH_camsi_104 | 5 | 10 | 0.0000000000107462 |
| Camellia sinensis var. sinensis | Chr4 | 2 | CH_camsi_442 | 3 | 5 | 0.00000901709 |
| Corylus avellana | 9 | 2 | CH_cav_485 | 2 | 2 | 0.000766695 |
| Coffea canephora | chr11 | 2 | CH_ccan_211 | 2 | 2 | 0.0000638836 |
| Citrus clementina | scaffold_6 | 2 | CH_ccl_174 | 3 | 3 | 0.000000565268 |
| Carpinus fangiana | Cfa03 | 2 | CH_cfa_127 | 3 | 4 | 0.000000688229 |
| Cardamine hirsuta | Chr5 | 2 | CH_chi_157 | 3 | 3 | 0.00000118251 |
| Carya illinoinensis | Chr07 | 2 | CH_cil_163 | 4 | 5 | 0.00000000357486 |
| Corchorus olitorius | AWUE01019720.1 | 2 | CH_col_15 | 4 | 6 | 0.00000000560704 |
| Capsella rubella | scaffold_5 | 2 | CH_cru_182 | 3 | 3 | 0.00000132315 |
| Daucus carota | DCARv2_Chr8 | 2 | CH_dca_148 | 3 | 3 | 0.00000174505 |
| Erigeron canadensis | Conyza_canadensis_scaffold:6 | 2 | CH_eca_183 | 3 | 4 | 0.00000101471 |
| Eucalyptus grandis | Chr09 | 2 | CH_egr_226 | 5 | 8 | 0.00000000000390147 |
| Erythranthe guttata | scaffold_12 | 2 | CH_egut_106 | 4 | 5 | 0.00000000121597 |
| Eutrema salsugineum | scaffold_6 | 2 | CH_esa_112 | 3 | 3 | 0.00000143526 |
| Fragaria vesca | Fvb4 | 2 | CH_fve_202 | 3 | 5 | 0.00000182159 |
| Glycine max | Gm20 | 2 | CH_gma_127 | 4 | 8 | 0.0000000114872 |
| Helianthus annuus | HanXRQChr14 | 2 | CH_han_153 | 4 | 4 | 0.000000000412032 |
| Helianthus annuus | HanXRQChr09 | 2 | CH_han_187 | 6 | 79 | 0.00000000657332 |
| Hydrangea macrophylla | Hma1.2p1_0409F.1 | 2 | CH_hma_52 | 3 | 3 | 0.0000000740453 |
| Magnolia biondii | Chr10 | 2 | CH_mbi_270 | 3 | 9 | 0.0000103959 |
| Malus domestica | Chr00 | 2 | CH_mdo_54 | 5 | 5 | 0.0000000000000310528 |
| Marchantia polymorpha | scaffold_67 | 2 | CH_mpo_18 | 4 | 6 | 0.00000000212127 |
| Nelumbo nucifera | chr4 | 2 | CH_nnu_23 | 6 | 10 | 0.00000000000000127719 |
| Prunus persica | Pp01 | 2 | CH_ppe_191 | 3 | 3 | 0.000000166944 |
| Pisum sativum | chr3LG5 | 2 | CH_psa_114 | 3 | 3 | 0.000000142858 |
| Papaver somniferum | NC_039367.1 | 2 | CH_pso_150 | 6 | 48 | 0.00000000175267 |
| Papaver somniferum | NC_039364.1 | 2 | CH_pso_30 | 10 | 71 | 4.45286e-19 |
| Papaver somniferum | NW_020625486.1 | 2 | CH_pso_380 | 3 | 4 | 0.0000166027 |
| Populus trichocarpa | Chr10 | 2 | CH_ptr_291 | 3 | 8 | 0.0000462588 |
| Quercus lobata | 3 | 2 | CH_qlo_42 | 8 | 13 | 6.54113e-23 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 2 | CH_rch_764 | 2 | 2 | 0.000597979 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 2 | CH_rch_765 | 2 | 2 | 0.000597979 |
| Salix brachista | GWHAAZH00000008 | 2 | CH_sbr_149 | 3 | 3 | 0.0000021681 |
| Salix brachista | GWHAAZH00000010 | 2 | CH_sbr_80 | 4 | 5 | 0.00000000375624 |
| Sequoiadendron giganteum | chr2 | 2 | CH_sgi_665 | 3 | 10 | 0.00000853887 |
| Selenicereus undatus | Scaffold_19641 | 2 | CH_sun_46 | 3 | 3 | 0.000000277212 |
| Trochodendron aralioides | group0 | 2 | CH_tar_181 | 3 | 3 | 0.00000196806 |
| Theobroma cacao | Chromosome_2 | 2 | CH_tca_100 | 4 | 5 | 0.00000000123733 |
| Vaccinium macrocarpon | chr4_Vaccinium_macrocarpon_Stevens_v1 | 2 | CH_vma_137 | 3 | 3 | 0.00000072536 |
| Vigna mungo | CM024069.1 | 2 | CH_vmu_111 | 3 | 3 | 0.00000035071 |
| Vitis vinifera | chr1 | 2 | CH_vvi_101 | 4 | 5 | 0.00000000138607 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |