Functional clusters

Information

  • Type MapMan
  • Description Solute transport.carrier-mediated transport.IT superfamily.DASS family.di-/tricarboxylate transporter (TDT)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC06 1 CH_bca_286 3 6 0.000000274145
Carpinus fangiana Cfa01 1 CH_cfa_230 2 2 0.0000757346
Fragaria vesca Fvb3 1 CH_fve_267 2 2 0.0000589102
Glycine max Gm09 1 CH_gma_441 2 2 0.000227734
Malus domestica Chr10 1 CH_mdo_472 2 2 0.000113763
Prunus persica Pp04 1 CH_ppe_336 2 2 0.0000745962
Rosa chinensis RcHm_v2.0_Chr5 1 CH_rch_478 2 2 0.0000398653
Vigna mungo CM024075.1 1 CH_vmu_199 2 2 0.0000646141
Brassica carinata ChrC06 2 CH_bca_286 3 6 0.000000274145
Carpinus fangiana Cfa01 2 CH_cfa_230 2 2 0.0000757346
Fragaria vesca Fvb3 2 CH_fve_267 2 2 0.0000589102
Glycine max Gm09 2 CH_gma_441 2 2 0.000227734
Malus domestica Chr10 2 CH_mdo_472 2 2 0.000113763
Prunus persica Pp04 2 CH_ppe_336 2 2 0.0000745962
Rosa chinensis RcHm_v2.0_Chr5 2 CH_rch_478 2 2 0.0000398653
Vigna mungo CM024075.1 2 CH_vmu_199 2 2 0.0000646141

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001