Functional clusters

Information

  • Type MapMan
  • Description Solute transport.carrier-mediated transport.BART superfamily.BASS family.2-keto acid transporter (BAT)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica rapa A03 1 CH_bra_56 4 6 0.00000000117478
Camellia sinensis var. sinensis Chr6 1 CH_camsi_878 2 2 0.000687821
Cicer arietinum L. Ca_LG3_v3 1 CH_car_308 2 2 0.000778301
Corylus avellana 4 1 CH_cav_215 3 11 0.0000508595
Durio zibethinus NW_019167860.1 1 CH_dzi_403 2 2 0.000973326
Lactuca sativa Lsat_1_v8_lg_6 1 CH_lsa_83 4 4 0.0000000000285206
Pisum sativum chr1LG6 1 CH_psa_331 2 2 0.000312981
Pisum sativum chr2LG1 1 CH_psa_332 2 2 0.000312981
Sequoiadendron giganteum chr11 1 CH_sgi_1103 2 2 0.000146145
Vigna mungo CM024079.1 1 CH_vmu_394 2 2 0.000646141
Vitis vinifera chr19 1 CH_vvi_431 2 2 0.00076063
Brassica rapa A03 2 CH_bra_56 4 6 0.00000000117478
Camellia sinensis var. sinensis Chr6 2 CH_camsi_878 2 2 0.000687821
Cicer arietinum L. Ca_LG3_v3 2 CH_car_308 2 2 0.000778301
Corylus avellana 4 2 CH_cav_215 3 11 0.0000508595
Durio zibethinus NW_019167860.1 2 CH_dzi_403 2 2 0.000973326
Eucalyptus grandis Chr05 2 CH_egr_494 3 4 0.000000411028
Lotus japonicus chr2 2 CH_lja_409 2 2 0.000715077
Lactuca sativa Lsat_1_v8_lg_6 2 CH_lsa_83 4 4 0.0000000000285206
Pisum sativum chr1LG6 2 CH_psa_331 2 2 0.000312981
Pisum sativum chr2LG1 2 CH_psa_332 2 2 0.000312981
Sequoiadendron giganteum chr11 2 CH_sgi_1103 2 2 0.000146145
Vigna mungo CM024079.1 2 CH_vmu_394 2 2 0.000646141
Vitis vinifera chr19 2 CH_vvi_431 2 2 0.00076063

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001