Functional clusters

Information

  • Type MapMan
  • Description Solute transport.carrier-mediated transport.APC superfamily.cation:chloride co-transporter (CCC)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.13 1 CH_arhy_678 2 3 0.000538871
Brassica carinata ChrB03 1 CH_bca_633 2 2 0.0000641293
Chara braunii BFEA01000298 1 CH_cbr_102 2 3 0.000215773
Ceratophyllum demersum 2 1 CH_cde_245 2 2 0.000473878
Ceratophyllum demersum 5 1 CH_cde_246 2 2 0.000473878
Magnolia biondii Chr18 1 CH_mbi_140 3 5 0.0000000353791
Pisum sativum chr3LG5 1 CH_psa_296 2 2 0.00015649
Trochodendron aralioides group3 1 CH_tar_378 2 2 0.00018011
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.13 2 CH_arhy_678 2 3 0.000538871
Brassica carinata ChrB03 2 CH_bca_633 2 2 0.0000641293
Chara braunii BFEA01000298 2 CH_cbr_102 2 3 0.000215773
Ceratophyllum demersum 2 2 CH_cde_245 2 2 0.000473878
Ceratophyllum demersum 5 2 CH_cde_246 2 2 0.000473878
Magnolia biondii Chr18 2 CH_mbi_140 3 5 0.0000000353791
Pisum sativum chr3LG5 2 CH_psa_296 2 2 0.00015649
Trochodendron aralioides group3 2 CH_tar_378 2 2 0.00018011

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001