Functional clusters

Information

  • Type MapMan
  • Description Solute transport.carrier-mediated transport.APC superfamily.aromatic amino acid transporter (HAAAP)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr12 1 CH_acertr_245 3 17 0.0000506315
Acer truncatum chr2 1 CH_acertr_565 2 2 0.00070497
Avicennia marina ScioBoG_102841_HRSCAF_103114 1 CH_ama_101 2 2 0.000258665
Brassica carinata ChrC02 1 CH_bca_813 2 2 0.000213764
Daucus carota DCARv2_Chr6 1 CH_dca_36 4 4 0.00000000000389167
Lupinus albus Lalb_Chr10 1 CH_lal_317 2 2 0.000314895
Simmondsia chinensis GWHAASQ00000011 1 CH_sci_169 2 2 0.0000851426
Sequoiadendron giganteum chr2 1 CH_sgi_277 4 4 0.0000000000121398
Selaginella moellendorffii scaffold_14 1 CH_smo_144 2 4 0.000560172
Acer truncatum chr12 2 CH_acertr_245 3 17 0.0000506315
Acer truncatum chr2 2 CH_acertr_565 2 2 0.00070497
Avicennia marina ScioBoG_102841_HRSCAF_103114 2 CH_ama_101 2 2 0.000258665
Brassica carinata ChrC02 2 CH_bca_813 2 2 0.000213764
Daucus carota DCARv2_Chr6 2 CH_dca_36 4 4 0.00000000000389167
Lupinus albus Lalb_Chr10 2 CH_lal_317 2 2 0.000314895
Simmondsia chinensis GWHAASQ00000011 2 CH_sci_169 2 2 0.0000851426
Sequoiadendron giganteum chr2 2 CH_sgi_277 4 4 0.0000000000121398
Selaginella moellendorffii scaffold_14 2 CH_smo_144 2 4 0.000560172

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001