Functional clusters
Information
- Type MapMan
- Description Solute transport.carrier-mediated transport.APC superfamily.AAAP family
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_228 | 1 | CH_aag_52 | 3 | 3 | 0.0000128506 |
| Cardamine hirsuta | Chr8 | 1 | CH_chi_274 | 3 | 3 | 0.000132039 |
| Selaginella moellendorffii | scaffold_2 | 1 | CH_smo_33 | 5 | 8 | 0.0000000435543 |
| Anthoceros agrestis | Sc2ySwM_228 | 2 | CH_aag_52 | 3 | 3 | 0.0000128506 |
| Cardamine hirsuta | Chr8 | 2 | CH_chi_274 | 3 | 3 | 0.000132039 |
| Selaginella moellendorffii | scaffold_2 | 2 | CH_smo_33 | 5 | 8 | 0.0000000435543 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| 24.2.3.4.1 | Solute transport.carrier-mediated transport.APC superfamily.AAAP family.amino acid transporter (AAP) | 136 |
| 24.2.3.4.2 | Solute transport.carrier-mediated transport.APC superfamily.AAAP family.amino acid transporter (LHT) | 76 |
| 24.2.3.4.3 | Solute transport.carrier-mediated transport.APC superfamily.AAAP family.proline transporter (ProT) | 50 |
| 24.2.3.4.4 | Solute transport.carrier-mediated transport.APC superfamily.AAAP family.amino acid transporter (ANT) | 17 |
| 24.2.3.4.5 | Solute transport.carrier-mediated transport.APC superfamily.AAAP family.auxin transporter (AUX/LAX) | 10 |
| 24.2.3.4.6 | Solute transport.carrier-mediated transport.APC superfamily.AAAP family.gamma-aminobutyric acid transporter (GAT) | 52 |
| 24.2.3.4.7 | Solute transport.carrier-mediated transport.APC superfamily.AAAP family.solute transporter (AAAP) | 68 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |