Functional clusters
Information
- Type MapMan
- Description Solute transport.carrier-mediated transport.APC superfamily.NCS-1 family.nucleobase cation transporter (PLUTO)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Corylus avellana | 10 | 1 | CH_cav_354 | 2 | 2 | 0.000230008 |
Coffea canephora | chr6 | 1 | CH_ccan_175 | 2 | 4 | 0.0000255533 |
Gossypium raimondii | Chr06 | 1 | CH_gra_251 | 2 | 2 | 0.0000536107 |
Magnolia biondii | Chr18 | 1 | CH_mbi_179 | 3 | 6 | 0.000000283011 |
Simmondsia chinensis | GWHAASQ00000020 | 1 | CH_sci_42 | 3 | 3 | 0.0000000108744 |
Corylus avellana | 10 | 2 | CH_cav_354 | 2 | 2 | 0.000230008 |
Coffea canephora | chr6 | 2 | CH_ccan_175 | 2 | 4 | 0.0000255533 |
Gossypium hirsutum | A09 | 2 | CH_ghi_555 | 2 | 2 | 0.000160209 |
Gossypium hirsutum | D09 | 2 | CH_ghi_556 | 2 | 2 | 0.000160209 |
Gossypium raimondii | Chr06 | 2 | CH_gra_251 | 2 | 2 | 0.0000536107 |
Magnolia biondii | Chr18 | 2 | CH_mbi_179 | 3 | 6 | 0.000000283011 |
Simmondsia chinensis | GWHAASQ00000020 | 2 | CH_sci_42 | 3 | 3 | 0.0000000108744 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |