Functional clusters

Information

  • Type MapMan
  • Description Solute transport.carrier-mediated transport.APC superfamily.SulP family.sulfate transporter (SULTR)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_344 1 CH_aag_182 2 3 0.000722263
Acer truncatum chr13 1 CH_acertr_187 3 3 0.00000271362
Actinidia chinensis Lachesis_group19 1 CH_ach_63 3 3 0.000005046
Avicennia marina ScioBoG_26769_HRSCAF_26899 1 CH_ama_43 3 4 0.0000249684
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.20 1 CH_arhy_387 3 3 0.0000143321
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.10 1 CH_arhy_438 3 4 0.0000573031
Brassica carinata ChrC08 1 CH_bca_225 4 7 0.000000067681
Brassica napus C09 1 CH_bna_360 3 3 0.00000892892
Corylus avellana 9 1 CH_cav_219 3 6 0.0000641242
Erigeron canadensis Conyza_canadensis_scaffold:2 1 CH_eca_58 5 10 0.0000000000473636
Erythranthe guttata scaffold_14 1 CH_egut_134 4 5 0.0000000224374
Fragaria vesca Fvb4 1 CH_fve_122 4 8 0.0000000306701
Lupinus albus Lalb_Chr01 1 CH_lal_164 3 3 0.0000295004
Lupinus albus Lalb_Chr05 1 CH_lal_234 3 4 0.000117922
Lupinus albus Lalb_Chr25 1 CH_lal_235 3 4 0.000117922
Lactuca sativa Lsat_1_v8_lg_9 1 CH_lsa_254 3 3 0.00000269494
Marchantia polymorpha scaffold_12 1 CH_mpo_28 3 3 0.0000000731891
Nelumbo nucifera chr5 1 CH_nnu_62 4 5 0.00000000169693
Nicotiana tabacum Nitab4.5_0000469 1 CH_nta_20 4 4 0.000000003968
Oryza sativa ssp. japonica chr03 1 CH_osa_85 4 9 0.000000039771
Petunia axillaris Peaxi162Scf00160 1 CH_pax_158 3 4 0.0000201882
Pisum sativum chr7LG7 1 CH_psa_188 3 4 0.0000186056
Pisum sativum chr1LG6 1 CH_psa_75 4 5 0.0000000103125
Papaver somniferum NC_039365.1 1 CH_pso_231 4 9 0.0000000757189
Quercus lobata 11 1 CH_qlo_285 4 4 0.00000000126344
Rhododendron simsii chr11 1 CH_rsi_247 3 3 0.00000284217
Salvia bowleyana GWHASIU00000005 1 CH_sbo_197 3 3 0.00000141285
Sequoiadendron giganteum chr1 1 CH_sgi_635 3 4 0.00000313206
Sequoiadendron giganteum chr2 1 CH_sgi_661 3 5 0.00000782868
Selenicereus undatus Scaffold_33679 1 CH_sun_80 4 19 0.00000807364
Vitis vinifera chr11 1 CH_vvi_216 3 3 0.00000394881
Vitis vinifera chr18 1 CH_vvi_230 3 4 0.0000157892
Anthoceros agrestis Sc2ySwM_344 2 CH_aag_182 2 3 0.000722263
Acer truncatum chr13 2 CH_acertr_187 3 3 0.00000271362
Actinidia chinensis Lachesis_group19 2 CH_ach_63 3 3 0.000005046
Avicennia marina ScioBoG_26769_HRSCAF_26899 2 CH_ama_43 3 4 0.0000249684
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.20 2 CH_arhy_387 3 3 0.0000143321
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.10 2 CH_arhy_438 3 4 0.0000573031
Brassica carinata ChrC08 2 CH_bca_225 4 7 0.000000067681
Corylus avellana 9 2 CH_cav_219 3 6 0.0000641242
Erigeron canadensis Conyza_canadensis_scaffold:2 2 CH_eca_58 5 10 0.0000000000473636
Eucalyptus grandis Chr03 2 CH_egr_577 3 4 0.0000058768
Eucalyptus grandis Chr09 2 CH_egr_603 3 5 0.0000146884
Erythranthe guttata scaffold_14 2 CH_egut_134 4 5 0.0000000224374
Fragaria vesca Fvb4 2 CH_fve_122 4 8 0.0000000306701
Lupinus albus Lalb_Chr01 2 CH_lal_164 3 3 0.0000295004
Lupinus albus Lalb_Chr05 2 CH_lal_234 3 4 0.000117922
Lupinus albus Lalb_Chr25 2 CH_lal_235 3 4 0.000117922
Lactuca sativa Lsat_1_v8_lg_9 2 CH_lsa_254 3 3 0.00000269494
Marchantia polymorpha scaffold_12 2 CH_mpo_28 3 3 0.0000000731891
Nelumbo nucifera chr5 2 CH_nnu_62 4 5 0.00000000169693
Nicotiana tabacum Nitab4.5_0000469 2 CH_nta_20 4 4 0.000000003968
Oryza sativa ssp. japonica chr03 2 CH_osa_85 4 9 0.000000039771
Petunia axillaris Peaxi162Scf00160 2 CH_pax_158 3 4 0.0000201882
Pisum sativum chr7LG7 2 CH_psa_188 3 4 0.0000186056
Pisum sativum chr1LG6 2 CH_psa_75 4 5 0.0000000103125
Papaver somniferum NC_039365.1 2 CH_pso_231 4 9 0.0000000757189
Quercus lobata 11 2 CH_qlo_285 4 4 0.00000000126344
Rhododendron simsii chr11 2 CH_rsi_247 3 3 0.00000284217
Salvia bowleyana GWHASIU00000005 2 CH_sbo_197 3 3 0.00000141285
Sequoiadendron giganteum chr1 2 CH_sgi_635 3 4 0.00000313206
Sequoiadendron giganteum chr2 2 CH_sgi_661 3 5 0.00000782868
Selenicereus undatus Scaffold_33679 2 CH_sun_80 4 19 0.00000807364
Vitis vinifera chr11 2 CH_vvi_216 3 3 0.00000394881
Vitis vinifera chr18 2 CH_vvi_230 3 4 0.0000157892

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001