Functional clusters

Information

  • Type MapMan
  • Description Solute transport.carrier-mediated transport.MFS superfamily.sugar transporter (SUT/SUC)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group28 1 CH_ach_101 3 10 0.0000875245
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 1 CH_arhy_344 3 3 0.0000044045
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.09 1 CH_arhy_345 3 3 0.0000044045
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 1 CH_arhy_391 3 4 0.0000176128
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.19 1 CH_arhy_392 3 4 0.0000176128
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.04 1 CH_arhy_487 3 7 0.000153975
Brassica carinata ChrC06 1 CH_bca_428 3 4 0.00000422159
Camellia sinensis var. sinensis Chr9 1 CH_camsi_121 4 4 0.000000000036448
Cicer arietinum L. Ca_LG7_v3 1 CH_car_59 3 3 0.000000508852
Chara braunii BFEA01000001 1 CH_cbr_101 2 3 0.000215773
Ceratophyllum demersum 1 1 CH_cde_283 2 2 0.000789796
Ceratophyllum demersum 6 1 CH_cde_284 2 2 0.000789796
Chenopodium quinoa C_Quinoa_Scaffold_4250 1 CH_cqu_180 3 3 0.000000282885
Cucumis sativus L. chr2 1 CH_csa_128 3 4 0.000000418068
Durio zibethinus NW_019168004.1 1 CH_dzi_109 3 4 0.000000451094
Erythranthe guttata scaffold_3 1 CH_egut_442 2 2 0.000436888
Fragaria x ananassa Fvb2-3 1 CH_fan_228 3 3 0.00000254736
Fragaria x ananassa Fvb5-1 1 CH_fan_501 4 61 0.0003523
Glycine max Gm16 1 CH_gma_79 4 4 0.000000000117296
Helianthus annuus HanXRQChr01 1 CH_han_162 4 5 0.000000000618816
Lupinus albus Lalb_Chr02 1 CH_lal_135 3 4 0.00000472563
Lotus japonicus chr5 1 CH_lja_182 3 3 0.00000168747
Magnolia biondii Chr02 1 CH_mbi_164 3 5 0.000000141511
Oryza sativa ssp. japonica chr10 1 CH_osa_103 3 3 0.0000000836762
Phaseolus vulgaris Chr04 1 CH_pvu_150 4 14 0.000000249617
Rhododendron simsii chr11 1 CH_rsi_20 11 25 2.96789e-28
Striga asiatica scaffold118 1 CH_sas_19 3 3 0.000000328525
Striga asiatica scaffold24 1 CH_sas_26 3 4 0.00000131391
Simmondsia chinensis GWHAASQ00000023 1 CH_sci_67 3 3 0.000000217487
Sequoiadendron giganteum chr2 1 CH_sgi_1133 2 2 0.000146145
Trochodendron aralioides group0 1 CH_tar_189 3 5 0.00000302692
Theobroma cacao Chromosome_8 1 CH_tca_87 4 5 0.00000000020624
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_127 3 3 0.00000045335
Vigna mungo CM024077.1 1 CH_vmu_253 3 13 0.000150187
Actinidia chinensis Lachesis_group28 2 CH_ach_101 3 10 0.0000875245
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 2 CH_arhy_344 3 3 0.0000044045
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.09 2 CH_arhy_345 3 3 0.0000044045
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 2 CH_arhy_391 3 4 0.0000176128
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.19 2 CH_arhy_392 3 4 0.0000176128
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.04 2 CH_arhy_487 3 7 0.000153975
Brassica carinata ChrC06 2 CH_bca_428 3 4 0.00000422159
Camellia sinensis var. sinensis Chr9 2 CH_camsi_121 4 4 0.000000000036448
Cicer arietinum L. Ca_LG7_v3 2 CH_car_59 3 3 0.000000508852
Chara braunii BFEA01000001 2 CH_cbr_101 2 3 0.000215773
Ceratophyllum demersum 1 2 CH_cde_283 2 2 0.000789796
Ceratophyllum demersum 6 2 CH_cde_284 2 2 0.000789796
Chenopodium quinoa C_Quinoa_Scaffold_4250 2 CH_cqu_180 3 3 0.000000282885
Cucumis sativus L. chr2 2 CH_csa_128 3 4 0.000000418068
Durio zibethinus NW_019168004.1 2 CH_dzi_109 3 4 0.000000451094
Eucalyptus grandis Chr06 2 CH_egr_530 3 7 0.00000179789
Erythranthe guttata scaffold_3 2 CH_egut_442 2 2 0.000436888
Fragaria x ananassa Fvb2-3 2 CH_fan_228 3 3 0.00000254736
Fragaria x ananassa Fvb5-1 2 CH_fan_501 4 61 0.0003523
Glycine max Gm16 2 CH_gma_79 4 4 0.000000000117296
Helianthus annuus HanXRQChr01 2 CH_han_162 4 5 0.000000000618816
Lupinus albus Lalb_Chr02 2 CH_lal_135 3 4 0.00000472563
Lotus japonicus chr5 2 CH_lja_182 3 3 0.00000168747
Magnolia biondii Chr02 2 CH_mbi_164 3 5 0.000000141511
Oryza sativa ssp. japonica chr10 2 CH_osa_103 3 3 0.0000000836762
Phaseolus vulgaris Chr04 2 CH_pvu_150 4 14 0.000000249617
Rhododendron simsii chr11 2 CH_rsi_20 11 25 2.96789e-28
Striga asiatica scaffold118 2 CH_sas_19 3 3 0.000000328525
Striga asiatica scaffold24 2 CH_sas_26 3 4 0.00000131391
Simmondsia chinensis GWHAASQ00000023 2 CH_sci_67 3 3 0.000000217487
Sequoiadendron giganteum chr2 2 CH_sgi_1133 2 2 0.000146145
Trochodendron aralioides group0 2 CH_tar_189 3 5 0.00000302692
Theobroma cacao Chromosome_8 2 CH_tca_87 4 5 0.00000000020624
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_127 3 3 0.00000045335
Vigna mungo CM024077.1 2 CH_vmu_253 3 13 0.000150187

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001