Functional clusters

Information

  • Type MapMan
  • Description Solute transport.carrier-mediated transport.MFS superfamily.OCT family.nicotinate transporter (NiaP)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Avicennia marina ScioBoG_102839_HRSCAF_103093 1 CH_ama_120 2 2 0.000517331
Aquilegia oxysepala CHR05 1 CH_aox_156 2 2 0.0000801989
Beta vulgaris Chr4_EL10_PGA_scaffold1 1 CH_bvu_82 3 3 0.0000000411285
Coffea canephora chr6 1 CH_ccan_34 4 28 0.00000000000448022
Citrus clementina scaffold_1 1 CH_ccl_26 6 6 5.85263e-19
Chenopodium quinoa C_Quinoa_Scaffold_2127 1 CH_cqu_212 3 5 0.00000117846
Erythranthe guttata scaffold_10 1 CH_egut_363 2 2 0.000218444
Gossypium raimondii Chr04 1 CH_gra_352 2 2 0.000321664
Lonicera japonica GWHAAZE00000005 1 CH_lonja_30 10 77 2.18927e-20
Magnolia biondii Chr13 1 CH_mbi_509 2 4 0.000291382
Nicotiana tabacum Nitab4.5_0000807 1 CH_nta_141 2 2 0.000329182
Petunia axillaris Peaxi162Scf00474 1 CH_pax_334 2 3 0.000633164
Populus trichocarpa Chr07 1 CH_ptr_499 2 2 0.000578001
Salvia bowleyana GWHASIU00000002 1 CH_sbo_338 2 2 0.000136494
Zea mays 1 1 CH_zma_279 2 2 0.000766969
Avicennia marina ScioBoG_102839_HRSCAF_103093 2 CH_ama_120 2 2 0.000517331
Aquilegia oxysepala CHR05 2 CH_aox_156 2 2 0.0000801989
Beta vulgaris Chr4_EL10_PGA_scaffold1 2 CH_bvu_82 3 3 0.0000000411285
Coffea canephora chr6 2 CH_ccan_34 4 28 0.00000000000448022
Citrus clementina scaffold_1 2 CH_ccl_26 6 6 5.85263e-19
Chenopodium quinoa C_Quinoa_Scaffold_2127 2 CH_cqu_212 3 5 0.00000117846
Erythranthe guttata scaffold_10 2 CH_egut_363 2 2 0.000218444
Gossypium hirsutum A08 2 CH_ghi_823 2 2 0.000747644
Gossypium hirsutum D08 2 CH_ghi_824 2 2 0.000747644
Gossypium raimondii Chr04 2 CH_gra_352 2 2 0.000321664
Lonicera japonica GWHAAZE00000005 2 CH_lonja_30 10 77 2.18927e-20
Magnolia biondii Chr13 2 CH_mbi_509 2 4 0.000291382
Nicotiana tabacum Nitab4.5_0000807 2 CH_nta_141 2 2 0.000329182
Petunia axillaris Peaxi162Scf00474 2 CH_pax_334 2 3 0.000633164
Populus trichocarpa Chr07 2 CH_ptr_499 2 2 0.000578001
Salvia bowleyana GWHASIU00000002 2 CH_sbo_338 2 2 0.000136494
Zea mays 1 2 CH_zma_279 2 2 0.000766969

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001