Functional clusters
Information
- Type MapMan
- Description Solute transport.carrier-mediated transport.MFS superfamily.OCT family.nicotinate transporter (NiaP)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Avicennia marina | ScioBoG_102839_HRSCAF_103093 | 1 | CH_ama_120 | 2 | 2 | 0.000517331 |
Aquilegia oxysepala | CHR05 | 1 | CH_aox_156 | 2 | 2 | 0.0000801989 |
Beta vulgaris | Chr4_EL10_PGA_scaffold1 | 1 | CH_bvu_82 | 3 | 3 | 0.0000000411285 |
Coffea canephora | chr6 | 1 | CH_ccan_34 | 4 | 28 | 0.00000000000448022 |
Citrus clementina | scaffold_1 | 1 | CH_ccl_26 | 6 | 6 | 5.85263e-19 |
Chenopodium quinoa | C_Quinoa_Scaffold_2127 | 1 | CH_cqu_212 | 3 | 5 | 0.00000117846 |
Erythranthe guttata | scaffold_10 | 1 | CH_egut_363 | 2 | 2 | 0.000218444 |
Gossypium raimondii | Chr04 | 1 | CH_gra_352 | 2 | 2 | 0.000321664 |
Lonicera japonica | GWHAAZE00000005 | 1 | CH_lonja_30 | 10 | 77 | 2.18927e-20 |
Magnolia biondii | Chr13 | 1 | CH_mbi_509 | 2 | 4 | 0.000291382 |
Nicotiana tabacum | Nitab4.5_0000807 | 1 | CH_nta_141 | 2 | 2 | 0.000329182 |
Petunia axillaris | Peaxi162Scf00474 | 1 | CH_pax_334 | 2 | 3 | 0.000633164 |
Populus trichocarpa | Chr07 | 1 | CH_ptr_499 | 2 | 2 | 0.000578001 |
Salvia bowleyana | GWHASIU00000002 | 1 | CH_sbo_338 | 2 | 2 | 0.000136494 |
Zea mays | 1 | 1 | CH_zma_279 | 2 | 2 | 0.000766969 |
Avicennia marina | ScioBoG_102839_HRSCAF_103093 | 2 | CH_ama_120 | 2 | 2 | 0.000517331 |
Aquilegia oxysepala | CHR05 | 2 | CH_aox_156 | 2 | 2 | 0.0000801989 |
Beta vulgaris | Chr4_EL10_PGA_scaffold1 | 2 | CH_bvu_82 | 3 | 3 | 0.0000000411285 |
Coffea canephora | chr6 | 2 | CH_ccan_34 | 4 | 28 | 0.00000000000448022 |
Citrus clementina | scaffold_1 | 2 | CH_ccl_26 | 6 | 6 | 5.85263e-19 |
Chenopodium quinoa | C_Quinoa_Scaffold_2127 | 2 | CH_cqu_212 | 3 | 5 | 0.00000117846 |
Erythranthe guttata | scaffold_10 | 2 | CH_egut_363 | 2 | 2 | 0.000218444 |
Gossypium hirsutum | A08 | 2 | CH_ghi_823 | 2 | 2 | 0.000747644 |
Gossypium hirsutum | D08 | 2 | CH_ghi_824 | 2 | 2 | 0.000747644 |
Gossypium raimondii | Chr04 | 2 | CH_gra_352 | 2 | 2 | 0.000321664 |
Lonicera japonica | GWHAAZE00000005 | 2 | CH_lonja_30 | 10 | 77 | 2.18927e-20 |
Magnolia biondii | Chr13 | 2 | CH_mbi_509 | 2 | 4 | 0.000291382 |
Nicotiana tabacum | Nitab4.5_0000807 | 2 | CH_nta_141 | 2 | 2 | 0.000329182 |
Petunia axillaris | Peaxi162Scf00474 | 2 | CH_pax_334 | 2 | 3 | 0.000633164 |
Populus trichocarpa | Chr07 | 2 | CH_ptr_499 | 2 | 2 | 0.000578001 |
Salvia bowleyana | GWHASIU00000002 | 2 | CH_sbo_338 | 2 | 2 | 0.000136494 |
Zea mays | 1 | 2 | CH_zma_279 | 2 | 2 | 0.000766969 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |