Functional clusters
Information
- Type MapMan
- Description Solute transport.carrier-mediated transport.solute transporter (MTCC)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr10 | 1 | CH_acertr_46 | 8 | 25 | 0.0000000000822536 |
| Aquilegia oxysepala | CHR04 | 1 | CH_aox_260 | 3 | 3 | 0.000330161 |
| Brassica napus | C01 | 1 | CH_bna_245 | 5 | 9 | 0.000000456165 |
| Camellia sinensis var. sinensis | Chr10 | 1 | CH_camsi_477 | 5 | 16 | 0.0000173376 |
| Camellia sinensis var. sinensis | Chr2 | 1 | CH_camsi_593 | 4 | 8 | 0.000115984 |
| Camellia sinensis var. sinensis | Chr1 | 1 | CH_camsi_688 | 4 | 9 | 0.00020836 |
| Chara braunii | BFEA01000081 | 1 | CH_cbr_75 | 3 | 3 | 0.000117804 |
| Chara braunii | BFEA01000326 | 1 | CH_cbr_79 | 4 | 13 | 0.000128814 |
| Cucumis melo | chr04 | 1 | CH_cme_262 | 3 | 3 | 0.000291598 |
| Carica papaya | supercontig_19 | 1 | CH_cpa_254 | 3 | 3 | 0.000234482 |
| Daucus carota | DCARv2_Chr2 | 1 | CH_dca_386 | 3 | 3 | 0.000395527 |
| Erigeron canadensis | Conyza_canadensis_scaffold:9 | 1 | CH_eca_379 | 3 | 3 | 0.000195791 |
| Fragaria x ananassa | Fvb6-4 | 1 | CH_fan_404 | 4 | 7 | 0.000123056 |
| Gossypium hirsutum | A10 | 1 | CH_ghi_188 | 5 | 5 | 0.00000000991452 |
| Gossypium hirsutum | D10 | 1 | CH_ghi_189 | 5 | 5 | 0.00000000991452 |
| Gossypium raimondii | Chr11 | 1 | CH_gra_103 | 5 | 5 | 0.00000000466508 |
| Manihot esculenta | Chromosome10 | 1 | CH_mes_132 | 5 | 5 | 0.00000000321974 |
| Medicago truncatula | chr8 | 1 | CH_mtr_319 | 4 | 4 | 0.000000329102 |
| Medicago truncatula | chr8 | 1 | CH_mtr_651 | 3 | 3 | 0.000208044 |
| Pisum sativum | chr4LG4 | 1 | CH_psa_308 | 6 | 71 | 0.00019192 |
| Populus trichocarpa | Chr17 | 1 | CH_ptr_159 | 5 | 6 | 0.0000000246515 |
| Quercus lobata | CM012294 | 1 | CH_qlo_909 | 4 | 12 | 0.000319141 |
| Rhododendron simsii | chr06 | 1 | CH_rsi_126 | 5 | 5 | 0.00000000182002 |
| Salvia bowleyana | GWHASIU00000006 | 1 | CH_sbo_54 | 9 | 31 | 0.000000000000357362 |
| Sechium edule | LG09 | 1 | CH_sed_141 | 4 | 5 | 0.0000081666 |
| Sequoiadendron giganteum | chr3 | 1 | CH_sgi_1169 | 3 | 3 | 0.000186514 |
| Sequoiadendron giganteum | chr4 | 1 | CH_sgi_1170 | 3 | 3 | 0.000186514 |
| Sequoiadendron giganteum | chr4 | 1 | CH_sgi_1171 | 3 | 3 | 0.000186514 |
| Sequoiadendron giganteum | chr4 | 1 | CH_sgi_1384 | 3 | 4 | 0.000745138 |
| Sequoiadendron giganteum | chr10 | 1 | CH_sgi_559 | 4 | 4 | 0.000000299854 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_399 | 1 | CH_tpr_341 | 3 | 3 | 0.000393328 |
| Utricularia gibba | unitig_699 | 1 | CH_ugi_308 | 4 | 14 | 0.00089544 |
| Acer truncatum | chr10 | 2 | CH_acertr_46 | 8 | 25 | 0.0000000000822536 |
| Aquilegia oxysepala | CHR04 | 2 | CH_aox_260 | 3 | 3 | 0.000330161 |
| Camellia sinensis var. sinensis | Chr10 | 2 | CH_camsi_477 | 5 | 16 | 0.0000173376 |
| Camellia sinensis var. sinensis | Chr2 | 2 | CH_camsi_593 | 4 | 8 | 0.000115984 |
| Camellia sinensis var. sinensis | Chr1 | 2 | CH_camsi_688 | 4 | 9 | 0.00020836 |
| Chara braunii | BFEA01000081 | 2 | CH_cbr_75 | 3 | 3 | 0.000117804 |
| Chara braunii | BFEA01000326 | 2 | CH_cbr_79 | 4 | 13 | 0.000128814 |
| Cucumis melo | chr04 | 2 | CH_cme_262 | 3 | 3 | 0.000291598 |
| Carica papaya | supercontig_19 | 2 | CH_cpa_254 | 3 | 3 | 0.000234482 |
| Daucus carota | DCARv2_Chr2 | 2 | CH_dca_386 | 3 | 3 | 0.000395527 |
| Erigeron canadensis | Conyza_canadensis_scaffold:9 | 2 | CH_eca_379 | 3 | 3 | 0.000195791 |
| Fragaria x ananassa | Fvb6-4 | 2 | CH_fan_404 | 4 | 7 | 0.000123056 |
| Gossypium hirsutum | A10 | 2 | CH_ghi_188 | 5 | 5 | 0.00000000991452 |
| Gossypium hirsutum | D10 | 2 | CH_ghi_189 | 5 | 5 | 0.00000000991452 |
| Gossypium raimondii | Chr11 | 2 | CH_gra_103 | 5 | 5 | 0.00000000466508 |
| Manihot esculenta | Chromosome10 | 2 | CH_mes_132 | 5 | 5 | 0.00000000321974 |
| Pisum sativum | chr4LG4 | 2 | CH_psa_308 | 6 | 71 | 0.00019192 |
| Populus trichocarpa | Chr17 | 2 | CH_ptr_159 | 5 | 6 | 0.0000000246515 |
| Quercus lobata | CM012294 | 2 | CH_qlo_909 | 4 | 12 | 0.000319141 |
| Rhododendron simsii | chr06 | 2 | CH_rsi_126 | 5 | 5 | 0.00000000182002 |
| Salvia bowleyana | GWHASIU00000006 | 2 | CH_sbo_54 | 9 | 31 | 0.000000000000357362 |
| Sechium edule | LG09 | 2 | CH_sed_141 | 4 | 5 | 0.0000081666 |
| Sequoiadendron giganteum | chr3 | 2 | CH_sgi_1169 | 3 | 3 | 0.000186514 |
| Sequoiadendron giganteum | chr4 | 2 | CH_sgi_1170 | 3 | 3 | 0.000186514 |
| Sequoiadendron giganteum | chr4 | 2 | CH_sgi_1171 | 3 | 3 | 0.000186514 |
| Sequoiadendron giganteum | chr4 | 2 | CH_sgi_1384 | 3 | 4 | 0.000745138 |
| Sequoiadendron giganteum | chr10 | 2 | CH_sgi_559 | 4 | 4 | 0.000000299854 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_399 | 2 | CH_tpr_341 | 3 | 3 | 0.000393328 |
| Utricularia gibba | unitig_699 | 2 | CH_ugi_308 | 4 | 14 | 0.00089544 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |