Functional clusters
Information
- Type MapMan
- Description Solute transport.carrier-mediated transport.OPT family.iron chelator transporter (YSL)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.15 | 1 | CH_arhy_368 | 3 | 6 | 0.00000768746 |
| Amborella trichopoda | AmTr_v1.0_scaffold00029 | 1 | CH_atr_125 | 3 | 3 | 0.00000270745 |
| Amborella trichopoda | AmTr_v1.0_scaffold00154 | 1 | CH_atr_148 | 3 | 6 | 0.0000540942 |
| Amborella trichopoda | AmTr_v1.0_scaffold00016 | 1 | CH_atr_52 | 4 | 4 | 0.0000000010755 |
| Camellia sinensis var. sinensis | Chr1 | 1 | CH_camsi_481 | 3 | 7 | 0.000018203 |
| Corylus avellana | 7 | 1 | CH_cav_194 | 3 | 5 | 0.0000145413 |
| Coffea canephora | chr7 | 1 | CH_ccan_257 | 2 | 2 | 0.000153321 |
| Carya illinoinensis | Chr16 | 1 | CH_cil_26 | 8 | 9 | 1.25558e-21 |
| Daucus carota | DCARv2_Chr7 | 1 | CH_dca_265 | 3 | 8 | 0.00015522 |
| Eucalyptus grandis | Chr11 | 1 | CH_egr_209 | 5 | 5 | 0.000000000000754146 |
| Populus trichocarpa | Chr17 | 1 | CH_ptr_68 | 5 | 6 | 0.000000000000646376 |
| Rhododendron simsii | chr10 | 1 | CH_rsi_62 | 5 | 6 | 0.000000000000196648 |
| Sequoiadendron giganteum | HRSCAF_1 | 1 | CH_sgi_350 | 4 | 6 | 0.00000000109228 |
| Solanum tuberosum | ST4.03ch05 | 1 | CH_stu_218 | 5 | 64 | 0.00000050176 |
| Trochodendron aralioides | group8 | 1 | CH_tar_232 | 3 | 7 | 0.0000415933 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.15 | 2 | CH_arhy_368 | 3 | 6 | 0.00000768746 |
| Amborella trichopoda | AmTr_v1.0_scaffold00029 | 2 | CH_atr_125 | 3 | 3 | 0.00000270745 |
| Amborella trichopoda | AmTr_v1.0_scaffold00154 | 2 | CH_atr_148 | 3 | 6 | 0.0000540942 |
| Amborella trichopoda | AmTr_v1.0_scaffold00016 | 2 | CH_atr_52 | 4 | 4 | 0.0000000010755 |
| Camellia sinensis var. sinensis | Chr1 | 2 | CH_camsi_481 | 3 | 7 | 0.000018203 |
| Corylus avellana | 7 | 2 | CH_cav_194 | 3 | 5 | 0.0000145413 |
| Coffea canephora | chr7 | 2 | CH_ccan_257 | 2 | 2 | 0.000153321 |
| Carya illinoinensis | Chr16 | 2 | CH_cil_26 | 8 | 9 | 1.25558e-21 |
| Daucus carota | DCARv2_Chr7 | 2 | CH_dca_265 | 3 | 8 | 0.00015522 |
| Eucalyptus grandis | Chr11 | 2 | CH_egr_209 | 5 | 5 | 0.000000000000754146 |
| Populus trichocarpa | Chr17 | 2 | CH_ptr_68 | 5 | 6 | 0.000000000000646376 |
| Rhododendron simsii | chr10 | 2 | CH_rsi_62 | 5 | 6 | 0.000000000000196648 |
| Sequoiadendron giganteum | HRSCAF_1 | 2 | CH_sgi_350 | 4 | 6 | 0.00000000109228 |
| Solanum tuberosum | ST4.03ch05 | 2 | CH_stu_218 | 5 | 64 | 0.00000050176 |
| Trochodendron aralioides | group8 | 2 | CH_tar_232 | 3 | 7 | 0.0000415933 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |