Functional clusters
Information
- Type MapMan
- Description Solute transport.carrier-mediated transport.OPT family
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_8 | 1 | CH_aly_263 | 3 | 6 | 0.0000887761 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_12 | 1 | CH_amhyb_177 | 3 | 10 | 0.000210013 |
| Arabidopsis thaliana | Chr5 | 1 | CH_ath_204 | 3 | 6 | 0.0000200823 |
| Brassica carinata | ChrC04 | 1 | CH_bca_761 | 3 | 6 | 0.000194324 |
| Capsicum annuum | PGAv.1.6.scaffold567 | 1 | CH_can_429 | 3 | 9 | 0.000699568 |
| Carpinus fangiana | Cfa05 | 1 | CH_cfa_395 | 3 | 11 | 0.000792417 |
| Cardamine hirsuta | Chr8 | 1 | CH_chi_209 | 3 | 5 | 0.0000584308 |
| Capsella rubella | scaffold_8 | 1 | CH_cru_237 | 3 | 5 | 0.000054484 |
| Cucumis sativus L. | chr5 | 1 | CH_csa_290 | 3 | 7 | 0.000416109 |
| Eutrema salsugineum | scaffold_2 | 1 | CH_esa_150 | 3 | 5 | 0.0000590982 |
| Nelumbo nucifera | chr1 | 1 | CH_nnu_463 | 3 | 14 | 0.000844537 |
| Rhododendron simsii | chr03 | 1 | CH_rsi_469 | 3 | 8 | 0.000284877 |
| Schrenkiella parvula | ch6-6 | 1 | CH_spa_156 | 3 | 5 | 0.0000631754 |
| Vanilla planifolia | CM028155.1 | 1 | CH_vpl_277 | 4 | 24 | 0.000222489 |
| Arabidopsis lyrata | scaffold_8 | 2 | CH_aly_263 | 3 | 6 | 0.0000887761 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_12 | 2 | CH_amhyb_177 | 3 | 10 | 0.000210013 |
| Arabidopsis thaliana | Chr5 | 2 | CH_ath_204 | 3 | 6 | 0.0000200823 |
| Brassica carinata | ChrC04 | 2 | CH_bca_761 | 3 | 6 | 0.000194324 |
| Capsicum annuum | PGAv.1.6.scaffold567 | 2 | CH_can_429 | 3 | 9 | 0.000699568 |
| Carpinus fangiana | Cfa05 | 2 | CH_cfa_395 | 3 | 11 | 0.000792417 |
| Cardamine hirsuta | Chr8 | 2 | CH_chi_209 | 3 | 5 | 0.0000584308 |
| Capsella rubella | scaffold_8 | 2 | CH_cru_237 | 3 | 5 | 0.000054484 |
| Cucumis sativus L. | chr5 | 2 | CH_csa_290 | 3 | 7 | 0.000416109 |
| Eutrema salsugineum | scaffold_2 | 2 | CH_esa_150 | 3 | 5 | 0.0000590982 |
| Nelumbo nucifera | chr1 | 2 | CH_nnu_463 | 3 | 14 | 0.000844537 |
| Rhododendron simsii | chr03 | 2 | CH_rsi_469 | 3 | 8 | 0.000284877 |
| Schrenkiella parvula | ch6-6 | 2 | CH_spa_156 | 3 | 5 | 0.0000631754 |
| Vanilla planifolia | CM028155.1 | 2 | CH_vpl_277 | 4 | 24 | 0.000222489 |
Available child term results
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |