Functional clusters

Information

  • Type MapMan
  • Description Solute transport.primary active transport.P-type ATPase superfamily.P4 family.phospholipid flippase complex.P4-type ATPase component ALA

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr11 1 CH_acertr_572 3 17 0.000833566
Camellia sinensis var. sinensis Chr5 1 CH_camsi_448 4 24 0.00000935329
Chlamydomonas reinhardtii chromosome_12 1 CH_cre_58 2 2 0.0006824
Helianthus annuus HanXRQChr04 1 CH_han_534 4 45 0.000123615
Oryza sativa ssp. japonica chr03 1 CH_osa_141 3 3 0.00000119657
Quercus lobata 10 1 CH_qlo_492 3 3 0.000000879652
Sechium edule LG11 1 CH_sed_66 4 5 0.0000000166611
Sapria himalayana scaffold76_2129029 1 CH_shi_25 4 8 0.00000000494448
Vanilla planifolia CM028153.1 1 CH_vpl_106 3 3 0.00000933598
Zea mays 1 1 CH_zma_101 3 3 0.00000219616
Acer truncatum chr11 2 CH_acertr_572 3 17 0.000833566
Camellia sinensis var. sinensis Chr5 2 CH_camsi_448 4 24 0.00000935329
Chlamydomonas reinhardtii chromosome_12 2 CH_cre_58 2 2 0.0006824
Eucalyptus grandis Chr05 2 CH_egr_635 3 5 0.0000287566
Eucalyptus grandis Chr05 2 CH_egr_657 3 6 0.0000574952
Helianthus annuus HanXRQChr04 2 CH_han_534 4 45 0.000123615
Oryza sativa ssp. japonica chr03 2 CH_osa_141 3 3 0.00000119657
Quercus lobata 10 2 CH_qlo_492 3 3 0.000000879652
Sechium edule LG11 2 CH_sed_66 4 5 0.0000000166611
Sapria himalayana scaffold76_2129029 2 CH_shi_25 4 8 0.00000000494448
Vanilla planifolia CM028153.1 2 CH_vpl_106 3 3 0.00000933598
Zea mays 1 2 CH_zma_101 3 3 0.00000219616

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001