Functional clusters

Information

  • Type MapMan
  • Description Solute transport.primary active transport.V-type ATPase complex.membrane V0 subcomplex.subunit c

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_5 1 CH_amhyb_232 2 2 0.000505051
Coffea canephora chr10 1 CH_ccan_328 2 8 0.000536609
Nelumbo nucifera chr1 1 CH_nnu_467 2 2 0.000915631
Sechium edule LG03 1 CH_sed_101 3 3 0.000000641322
Solanum lycopersicum SL4.0ch10 1 CH_sly_176 3 3 0.000000289388
Solanum pennellii Spenn-ch10 1 CH_spe_150 3 3 0.000000103868
Amaranthus hybridus AmaHy_arrow1_Scaffold_5 2 CH_amhyb_232 2 2 0.000505051
Coffea canephora chr10 2 CH_ccan_328 2 8 0.000536609
Nelumbo nucifera chr1 2 CH_nnu_467 2 2 0.000915631
Sechium edule LG03 2 CH_sed_101 3 3 0.000000641322
Solanum lycopersicum SL4.0ch10 2 CH_sly_176 3 3 0.000000289388
Solanum pennellii Spenn-ch10 2 CH_spe_150 3 3 0.000000103868

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001