Functional clusters

Information

  • Type MapMan
  • Description Protein translocation.nucleus.nucleocytoplasmic transport.cargo receptor activities.import karyopherin (IMB3)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-2 1 CH_aar_154 2 2 0.0000912326
Capsicum annuum PGAv.1.6.scaffold222 1 CH_can_309 3 14 0.000208224
Capsicum annuum PGAv.1.6.scaffold282 1 CH_can_51 5 9 0.00000000000246387
Corylus avellana 10 1 CH_cav_101 3 3 0.0000000881765
Carpinus fangiana Cfa03 1 CH_cfa_385 2 2 0.000757346
Davidia involucrata GWHABJS00000007 1 CH_din_336 2 2 0.000150038
Magnolia biondii Chr01 1 CH_mbi_674 2 3 0.00087414
Malus domestica Chr11 1 CH_mdo_254 3 6 0.000000862666
Malus domestica Chr03 1 CH_mdo_681 2 2 0.000568817
Manihot esculenta Chromosome12 1 CH_mes_492 2 2 0.000915947
Nicotiana tabacum Nitab4.5_0000551 1 CH_nta_9 5 13 0.0000000000293598
Papaver somniferum NC_039366.1 1 CH_pso_217 3 4 0.0000000608743
Papaver somniferum NC_039368.1 1 CH_pso_218 3 4 0.0000000608743
Rosa chinensis RcHm_v2.0_Chr5 1 CH_rch_435 3 18 0.0000194381
Aethionema arabicum LG-2 2 CH_aar_154 2 2 0.0000912326
Capsicum annuum PGAv.1.6.scaffold222 2 CH_can_309 3 14 0.000208224
Capsicum annuum PGAv.1.6.scaffold282 2 CH_can_51 5 9 0.00000000000246387
Corylus avellana 10 2 CH_cav_101 3 3 0.0000000881765
Carpinus fangiana Cfa03 2 CH_cfa_385 2 2 0.000757346
Davidia involucrata GWHABJS00000007 2 CH_din_336 2 2 0.000150038
Magnolia biondii Chr01 2 CH_mbi_674 2 3 0.00087414
Malus domestica Chr11 2 CH_mdo_254 3 6 0.000000862666
Malus domestica Chr03 2 CH_mdo_681 2 2 0.000568817
Manihot esculenta Chromosome12 2 CH_mes_492 2 2 0.000915947
Nicotiana tabacum Nitab4.5_0000551 2 CH_nta_9 5 13 0.0000000000293598
Papaver somniferum NC_039366.1 2 CH_pso_217 3 4 0.0000000608743
Papaver somniferum NC_039368.1 2 CH_pso_218 3 4 0.0000000608743
Rosa chinensis RcHm_v2.0_Chr5 2 CH_rch_435 3 18 0.0000194381

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001