Functional clusters

Information

  • Type MapMan
  • Description Protein translocation.nucleus.nucleocytoplasmic transport.cargo receptor activities.import karyopherin (IMB1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Coffea canephora chr2 1 CH_ccan_371 2 12 0.000843234
Citrullus lanatus CG_Chr01 1 CH_cla_155 2 3 0.000266123
Cucumis melo chr09 1 CH_cme_286 2 3 0.000600367
Capsella rubella scaffold_3 1 CH_cru_320 2 2 0.000219346
Cucumis sativus L. chr5 1 CH_csa_245 2 3 0.000250417
Durio zibethinus NW_019167827.1 1 CH_dzi_401 2 2 0.000973326
Durio zibethinus NW_019168381.1 1 CH_dzi_402 2 2 0.000973326
Erigeron canadensis Conyza_canadensis_scaffold:1 1 CH_eca_353 2 2 0.000134617
Eutrema salsugineum scaffold_13 1 CH_esa_244 2 2 0.00022845
Fragaria x ananassa Fvb6-3 1 CH_fan_572 3 20 0.000566173
Gossypium raimondii Chr06 1 CH_gra_415 2 2 0.000536107
Gossypium raimondii Chr08 1 CH_gra_416 2 2 0.000536107
Helianthus annuus HanXRQChr06 1 CH_han_574 2 2 0.000231857
Sechium edule LG01 1 CH_sed_297 2 2 0.000428052
Theobroma cacao Chromosome_3 1 CH_tca_347 2 2 0.000219716
Vanilla planifolia JADCNL010000330.1 1 CH_vpl_368 2 2 0.00073888
Coffea canephora chr2 2 CH_ccan_371 2 12 0.000843234
Citrullus lanatus CG_Chr01 2 CH_cla_155 2 3 0.000266123
Cucumis melo chr09 2 CH_cme_286 2 3 0.000600367
Capsella rubella scaffold_3 2 CH_cru_320 2 2 0.000219346
Cucumis sativus L. chr5 2 CH_csa_245 2 3 0.000250417
Durio zibethinus NW_019167827.1 2 CH_dzi_401 2 2 0.000973326
Durio zibethinus NW_019168381.1 2 CH_dzi_402 2 2 0.000973326
Erigeron canadensis Conyza_canadensis_scaffold:1 2 CH_eca_353 2 2 0.000134617
Eutrema salsugineum scaffold_13 2 CH_esa_244 2 2 0.00022845
Fragaria x ananassa Fvb6-3 2 CH_fan_572 3 20 0.000566173
Gossypium raimondii Chr06 2 CH_gra_415 2 2 0.000536107
Gossypium raimondii Chr08 2 CH_gra_416 2 2 0.000536107
Helianthus annuus HanXRQChr06 2 CH_han_574 2 2 0.000231857
Sechium edule LG01 2 CH_sed_297 2 2 0.000428052
Theobroma cacao Chromosome_3 2 CH_tca_347 2 2 0.000219716
Vanilla planifolia JADCNL010000330.1 2 CH_vpl_368 2 2 0.00073888

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001