Functional clusters

Information

  • Type MapMan
  • Description Protein translocation.nucleus.nucleocytoplasmic transport.cargo receptor activities

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_3 1 CH_aly_276 3 4 0.000156299
Amaranthus hybridus AmaHy_arrow1_Scaffold_2 1 CH_amhyb_215 3 5 0.000347615
Arabidopsis thaliana Chr3 1 CH_ath_205 3 4 0.0000221297
Glycine max Gm18 1 CH_gma_354 3 3 0.0000777742
Schrenkiella parvula ch3-1 1 CH_spa_239 3 5 0.000304159
Arabidopsis lyrata scaffold_3 2 CH_aly_276 3 4 0.000156299
Amaranthus hybridus AmaHy_arrow1_Scaffold_2 2 CH_amhyb_215 3 5 0.000347615
Arabidopsis thaliana Chr3 2 CH_ath_205 3 4 0.0000221297
Glycine max Gm18 2 CH_gma_354 3 3 0.0000777742
Schrenkiella parvula ch3-1 2 CH_spa_239 3 5 0.000304159

Available child term results

Ontology identifier Description Number of clusters
23.5.1.2.1 Protein translocation.nucleus.nucleocytoplasmic transport.cargo receptor activities.import karyopherin (IMPA) 29
23.5.1.2.10 Protein translocation.nucleus.nucleocytoplasmic transport.cargo receptor activities.export karyopherin (XPO2) 12
23.5.1.2.11 Protein translocation.nucleus.nucleocytoplasmic transport.cargo receptor activities.export karyopherin (XPO3/XPOT) 10
23.5.1.2.12 Protein translocation.nucleus.nucleocytoplasmic transport.cargo receptor activities.transport karyopherin (XPO4) 10
23.5.1.2.13 Protein translocation.nucleus.nucleocytoplasmic transport.cargo receptor activities.transport karyopherin (XPO5) 2
23.5.1.2.14 Protein translocation.nucleus.nucleocytoplasmic transport.cargo receptor activities.export karyopherin (XPO7) 24
23.5.1.2.15 Protein translocation.nucleus.nucleocytoplasmic transport.cargo receptor activities.transport karyopherin (TNPO3) 6
23.5.1.2.16 Protein translocation.nucleus.nucleocytoplasmic transport.cargo receptor activities.transport karyopherin (PLANTKAP) 9
23.5.1.2.2 Protein translocation.nucleus.nucleocytoplasmic transport.cargo receptor activities.import karyopherin (IMB1) 32
23.5.1.2.3 Protein translocation.nucleus.nucleocytoplasmic transport.cargo receptor activities.import karyopherin (IMB2) 8
23.5.1.2.4 Protein translocation.nucleus.nucleocytoplasmic transport.cargo receptor activities.import karyopherin (IMB3) 28
23.5.1.2.6 Protein translocation.nucleus.nucleocytoplasmic transport.cargo receptor activities.import karyopherin (IMB5) 10
23.5.1.2.7 Protein translocation.nucleus.nucleocytoplasmic transport.cargo receptor activities.import karyopherin (KA120) 14
23.5.1.2.8 Protein translocation.nucleus.nucleocytoplasmic transport.cargo receptor activities.import karyopherin (SAD2/EMA1) 10
23.5.1.2.9 Protein translocation.nucleus.nucleocytoplasmic transport.cargo receptor activities.export karyopherin (XPO1) 8

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001