Functional clusters

Information

  • Type MapMan
  • Description Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).nuclear basket.nucleoporin (NUA)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cicer arietinum L. Ca_LG1_v3 1 CH_car_147 2 2 0.0000778301
Corylus avellana 7 1 CH_cav_86 3 4 0.0000000352693
Magnolia biondii Chr02 1 CH_mbi_438 2 2 0.000145698
Malus domestica Chr10 1 CH_mdo_603 2 3 0.00034128
Olea europaea chr13 1 CH_oeu_152 2 2 0.0000533789
Sequoiadendron giganteum chr9 1 CH_sgi_387 3 3 0.00000000355983
Vaccinium macrocarpon chr10_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_216 2 2 0.0000929238
Vanilla planifolia CM028157.1 1 CH_vpl_78 3 13 0.00000234132
Cicer arietinum L. Ca_LG1_v3 2 CH_car_147 2 2 0.0000778301
Corylus avellana 7 2 CH_cav_86 3 4 0.0000000352693
Magnolia biondii Chr02 2 CH_mbi_438 2 2 0.000145698
Malus domestica Chr10 2 CH_mdo_603 2 3 0.00034128
Olea europaea chr13 2 CH_oeu_152 2 2 0.0000533789
Sequoiadendron giganteum chr9 2 CH_sgi_387 3 3 0.00000000355983
Vaccinium macrocarpon chr10_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_216 2 2 0.0000929238
Vanilla planifolia CM028157.1 2 CH_vpl_78 3 13 0.00000234132

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001