Functional clusters

Information

  • Type MapMan
  • Description Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).transmembrane ring.nucleoporin (NDC1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00049 1 CH_atr_167 2 2 0.0000794407
Magnolia biondii Chr06 1 CH_mbi_153 3 6 0.0000000707565
Medicago truncatula chr8 1 CH_mtr_555 3 35 0.0000662162
Utricularia gibba unitig_750 1 CH_ugi_130 2 2 0.0000734592
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_215 2 2 0.0000929238
Amborella trichopoda AmTr_v1.0_scaffold00049 2 CH_atr_167 2 2 0.0000794407
Magnolia biondii Chr06 2 CH_mbi_153 3 6 0.0000000707565
Utricularia gibba unitig_750 2 CH_ugi_130 2 2 0.0000734592
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_215 2 2 0.0000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001