Functional clusters

Information

  • Type MapMan
  • Description Protein translocation.peroxisome.importomer translocation system.cargo-receptor system.component Pex5

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_4 1 CH_amhyb_138 2 2 0.0000841751
Brassica carinata ChrB05 1 CH_bca_797 2 2 0.000213764
Corylus avellana 4 1 CH_cav_324 2 3 0.00023
Ceratophyllum demersum 3 1 CH_cde_100 2 2 0.0000789796
Carica papaya supercontig_12 1 CH_cpa_47 3 4 0.0000000542253
Chenopodium quinoa C_Quinoa_Scaffold_3458 1 CH_cqu_308 2 2 0.0000473821
Gossypium raimondii Chr09 1 CH_gra_283 2 3 0.000160828
Hydrangea macrophylla Hma1.2p1_0321F.1 1 CH_hma_228 2 3 0.000111086
Sequoiadendron giganteum chr6 1 CH_sgi_857 2 2 0.0000487151
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_239 2 2 0.0000929238
Amaranthus hybridus AmaHy_arrow1_Scaffold_4 2 CH_amhyb_138 2 2 0.0000841751
Brassica carinata ChrB05 2 CH_bca_797 2 2 0.000213764
Corylus avellana 4 2 CH_cav_324 2 3 0.00023
Ceratophyllum demersum 3 2 CH_cde_100 2 2 0.0000789796
Carica papaya supercontig_12 2 CH_cpa_47 3 4 0.0000000542253
Chenopodium quinoa C_Quinoa_Scaffold_3458 2 CH_cqu_308 2 2 0.0000473821
Gossypium raimondii Chr09 2 CH_gra_283 2 3 0.000160828
Hydrangea macrophylla Hma1.2p1_0321F.1 2 CH_hma_228 2 3 0.000111086
Sequoiadendron giganteum chr6 2 CH_sgi_857 2 2 0.0000487151
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_239 2 2 0.0000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001