Functional clusters

Information

  • Type MapMan
  • Description Protein translocation.endoplasmic reticulum.co-translational insertion system.accessory component TPR7

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group9 1 CH_ach_203 2 2 0.000325928
Avicennia marina ScioBoG_17730_HRSCAF_17811 1 CH_ama_99 2 2 0.000258665
Brassica carinata ChrC03 1 CH_bca_943 2 2 0.000448905
Brassica rapa A02 1 CH_bra_277 2 2 0.000257588
Petunia axillaris Peaxi162Scf00259 1 CH_pax_74 3 3 0.0000000297005
Rosa chinensis RcHm_v2.0_Chr1 1 CH_rch_431 3 23 0.0000168758
Rhododendron simsii chr13 1 CH_rsi_448 2 2 0.000193592
Sechium edule LG05 1 CH_sed_264 2 2 0.000214026
Actinidia chinensis Lachesis_group9 2 CH_ach_203 2 2 0.000325928
Avicennia marina ScioBoG_17730_HRSCAF_17811 2 CH_ama_99 2 2 0.000258665
Brassica carinata ChrC03 2 CH_bca_943 2 2 0.000448905
Brassica rapa A02 2 CH_bra_277 2 2 0.000257588
Petunia axillaris Peaxi162Scf00259 2 CH_pax_74 3 3 0.0000000297005
Rosa chinensis RcHm_v2.0_Chr1 2 CH_rch_431 3 23 0.0000168758
Rhododendron simsii chr13 2 CH_rsi_448 2 2 0.000193592
Sechium edule LG05 2 CH_sed_264 2 2 0.000214026

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001