Functional clusters

Information

  • Type MapMan
  • Description Protein translocation.endoplasmic reticulum.co-translational insertion system.SRP (signal recognition particle) complex.component SRP72

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_2 1 CH_aly_401 2 5 0.000659979
Aquilegia oxysepala CHR06 1 CH_aox_63 3 3 0.0000000385927
Arabidopsis thaliana Chr1 1 CH_ath_301 2 4 0.00017189
Camellia sinensis var. sinensis Chr6 1 CH_camsi_727 2 2 0.000275128
Capsella rubella scaffold_2 1 CH_cru_407 2 5 0.000731074
Daucus carota DCARv2_Chr6 1 CH_dca_232 2 2 0.0000637775
Lupinus albus Lalb_Chr12 1 CH_lal_10 6 7 4.39077e-19
Nelumbo nucifera chr4 1 CH_nnu_323 2 2 0.000130804
Rosa chinensis RcHm_v2.0_Chr4 1 CH_rch_555 2 3 0.000119593
Solanum pennellii Spenn-ch01 1 CH_spe_360 2 3 0.000133437
Solanum tuberosum ST4.03ch01 1 CH_stu_107 4 11 0.000000000665977
Trochodendron aralioides group8 1 CH_tar_116 3 3 0.0000000540676
Arabidopsis lyrata scaffold_2 2 CH_aly_401 2 5 0.000659979
Aquilegia oxysepala CHR06 2 CH_aox_63 3 3 0.0000000385927
Arabidopsis thaliana Chr1 2 CH_ath_301 2 4 0.00017189
Camellia sinensis var. sinensis Chr6 2 CH_camsi_727 2 2 0.000275128
Capsella rubella scaffold_2 2 CH_cru_407 2 5 0.000731074
Daucus carota DCARv2_Chr6 2 CH_dca_232 2 2 0.0000637775
Lupinus albus Lalb_Chr12 2 CH_lal_10 6 7 4.39077e-19
Nelumbo nucifera chr4 2 CH_nnu_323 2 2 0.000130804
Rosa chinensis RcHm_v2.0_Chr4 2 CH_rch_555 2 3 0.000119593
Solanum pennellii Spenn-ch01 2 CH_spe_360 2 3 0.000133437
Solanum tuberosum ST4.03ch01 2 CH_stu_107 4 11 0.000000000665977
Trochodendron aralioides group8 2 CH_tar_116 3 3 0.0000000540676

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001