Functional clusters

Information

  • Type MapMan
  • Description Protein translocation.chloroplast.inner envelope TIC translocation system.translocation channel (Tic110)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr1 1 CH_acertr_541 2 5 0.000704895
Arabidopsis lyrata scaffold_1 1 CH_aly_60 4 13 0.000000000616681
Davidia involucrata GWHABJS00000007 1 CH_din_358 2 2 0.000150038
Lonicera japonica GWHAAZE00000006 1 CH_lonja_554 2 2 0.000359324
Lonicera japonica GWHAAZE00000001 1 CH_lonja_555 2 2 0.000359324
Olea europaea chr22 1 CH_oeu_179 2 2 0.0000533789
Oryza sativa ssp. japonica chr10 1 CH_osa_298 2 4 0.000316857
Papaver somniferum NC_039366.1 1 CH_pso_375 3 32 0.0000150887
Salix brachista GWHAAZH00000019 1 CH_sbr_21 6 8 1.75285e-17
Sapria himalayana scaffold32_6892495 1 CH_shi_116 2 2 0.0000571804
Vanilla planifolia CM028156.1 1 CH_vpl_187 2 2 0.000073888
Acer truncatum chr1 2 CH_acertr_541 2 5 0.000704895
Arabidopsis lyrata scaffold_1 2 CH_aly_60 4 13 0.000000000616681
Davidia involucrata GWHABJS00000007 2 CH_din_358 2 2 0.000150038
Lonicera japonica GWHAAZE00000006 2 CH_lonja_554 2 2 0.000359324
Lonicera japonica GWHAAZE00000001 2 CH_lonja_555 2 2 0.000359324
Olea europaea chr22 2 CH_oeu_179 2 2 0.0000533789
Oryza sativa ssp. japonica chr10 2 CH_osa_298 2 4 0.000316857
Papaver somniferum NC_039366.1 2 CH_pso_375 3 32 0.0000150887
Salix brachista GWHAAZH00000019 2 CH_sbr_21 6 8 1.75285e-17
Sapria himalayana scaffold32_6892495 2 CH_shi_116 2 2 0.0000571804
Vanilla planifolia CM028156.1 2 CH_vpl_187 2 2 0.000073888

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001