Functional clusters

Information

  • Type MapMan
  • Description Protein translocation.chloroplast.inner envelope TIC translocation system

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Ceratophyllum demersum 5 1 CH_cde_15 6 25 0.00000000278223
Solanum lycopersicum SL4.0ch00 1 CH_sly_256 6 53 0.0000186997
Solanum lycopersicum SL4.0ch00 1 CH_sly_263 5 24 0.0000219204
Ceratophyllum demersum 5 2 CH_cde_15 6 25 0.00000000278223
Solanum lycopersicum SL4.0ch00 2 CH_sly_256 6 53 0.0000186997
Solanum lycopersicum SL4.0ch00 2 CH_sly_263 5 24 0.0000219204

Available child term results

Ontology identifier Description Number of clusters
23.1.3.1.1 Protein translocation.chloroplast.inner envelope TIC translocation system.TIC-20 complex.component Tic20-I/IV 16
23.1.3.1.3 Protein translocation.chloroplast.inner envelope TIC translocation system.TIC-20 complex.component Tic100 12
23.1.3.2 Protein translocation.chloroplast.inner envelope TIC translocation system.translocation channel (Tic110) 22
23.1.3.3 Protein translocation.chloroplast.inner envelope TIC translocation system.co-chaperone (Tic40) 8
23.1.3.4.1.2 Protein translocation.chloroplast.inner envelope TIC translocation system.AAA-ATPase motor complex.FtsH12-FtsHi subcomplex.component FtsHi 10
23.1.3.4.2 Protein translocation.chloroplast.inner envelope TIC translocation system.AAA-ATPase motor complex.regulatory component YCF2 31
23.1.3.4.3 Protein translocation.chloroplast.inner envelope TIC translocation system.AAA-ATPase motor complex.malate dehydrogenase component 4
23.1.3.5.1 Protein translocation.chloroplast.inner envelope TIC translocation system.redox regulon complex.component Tic32 73
23.1.3.5.2 Protein translocation.chloroplast.inner envelope TIC translocation system.redox regulon complex.component Tic55 6
23.1.3.6 Protein translocation.chloroplast.inner envelope TIC translocation system.regulatory factor (Tic22) 14
23.1.3.7 Protein translocation.chloroplast.inner envelope TIC translocation system.TOC-TIC interconnecting protein (Tic236) 7

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001