Functional clusters
Information
- Type MapMan
- Description Vesicle trafficking.exocytic trafficking.secretory vesicle trafficking
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Solanum lycopersicum | SL4.0ch07 | 1 | CH_sly_249 | 3 | 12 | 0.0000113613 |
| Solanum lycopersicum | SL4.0ch07 | 2 | CH_sly_249 | 3 | 12 | 0.0000113613 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| 22.5.3.1 | Vesicle trafficking.exocytic trafficking.secretory vesicle trafficking.membrane trafficking factor (GFS9) | 6 |
| 22.5.3.2.1 | Vesicle trafficking.exocytic trafficking.secretory vesicle trafficking.ECHIDNA-YIP trafficking complex.component ECHIDNA | 4 |
| 22.5.3.2.2 | Vesicle trafficking.exocytic trafficking.secretory vesicle trafficking.ECHIDNA-YIP trafficking complex.component YIP4 | 6 |
| 22.5.3.2.3 | Vesicle trafficking.exocytic trafficking.secretory vesicle trafficking.ECHIDNA-YIP trafficking complex.component YIP5 | 4 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |