Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.exocytic trafficking.exocytosis regulation.regulatory protein (SCAMP)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr10 1 CH_acertr_506 2 2 0.000422982
Amaranthus hybridus AmaHy_arrow1_Scaffold_7 1 CH_amhyb_243 2 2 0.000505051
Corylus avellana 4 1 CH_cav_484 2 2 0.000766695
Corchorus olitorius AWUE01020860.1 1 CH_col_86 2 2 0.000292099
Punica granatum NC_045130.1 1 CH_pgr_328 2 2 0.000450214
Quercus lobata 5 1 CH_qlo_896 2 2 0.000309773
Rosa chinensis RcHm_v2.0_Chr5 1 CH_rch_144 6 58 0.0000000000841949
Selenicereus undatus Scaffold_33678 1 CH_sun_284 2 2 0.000726639
Theobroma cacao Chromosome_6 1 CH_tca_148 3 3 0.0000000804614
Trifolium pratense Tp57577_TGAC_v2_LG4 1 CH_tpr_414 2 2 0.000756974
Acer truncatum chr10 2 CH_acertr_506 2 2 0.000422982
Amaranthus hybridus AmaHy_arrow1_Scaffold_7 2 CH_amhyb_243 2 2 0.000505051
Corylus avellana 4 2 CH_cav_484 2 2 0.000766695
Corchorus olitorius AWUE01020860.1 2 CH_col_86 2 2 0.000292099
Punica granatum NC_045130.1 2 CH_pgr_328 2 2 0.000450214
Quercus lobata 5 2 CH_qlo_896 2 2 0.000309773
Rosa chinensis RcHm_v2.0_Chr5 2 CH_rch_144 6 58 0.0000000000841949
Selenicereus undatus Scaffold_33678 2 CH_sun_284 2 2 0.000726639
Theobroma cacao Chromosome_6 2 CH_tca_148 3 3 0.0000000804614
Trifolium pratense Tp57577_TGAC_v2_LG4 2 CH_tpr_414 2 2 0.000756974

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001