Functional clusters
Information
- Type MapMan
- Description Vesicle trafficking.exocytic trafficking.exocytosis regulation.regulatory protein (SCAMP)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Acer truncatum | chr10 | 1 | CH_acertr_506 | 2 | 2 | 0.000422982 |
Amaranthus hybridus | AmaHy_arrow1_Scaffold_7 | 1 | CH_amhyb_243 | 2 | 2 | 0.000505051 |
Corylus avellana | 4 | 1 | CH_cav_484 | 2 | 2 | 0.000766695 |
Corchorus olitorius | AWUE01020860.1 | 1 | CH_col_86 | 2 | 2 | 0.000292099 |
Punica granatum | NC_045130.1 | 1 | CH_pgr_328 | 2 | 2 | 0.000450214 |
Quercus lobata | 5 | 1 | CH_qlo_896 | 2 | 2 | 0.000309773 |
Rosa chinensis | RcHm_v2.0_Chr5 | 1 | CH_rch_144 | 6 | 58 | 0.0000000000841949 |
Selenicereus undatus | Scaffold_33678 | 1 | CH_sun_284 | 2 | 2 | 0.000726639 |
Theobroma cacao | Chromosome_6 | 1 | CH_tca_148 | 3 | 3 | 0.0000000804614 |
Trifolium pratense | Tp57577_TGAC_v2_LG4 | 1 | CH_tpr_414 | 2 | 2 | 0.000756974 |
Acer truncatum | chr10 | 2 | CH_acertr_506 | 2 | 2 | 0.000422982 |
Amaranthus hybridus | AmaHy_arrow1_Scaffold_7 | 2 | CH_amhyb_243 | 2 | 2 | 0.000505051 |
Corylus avellana | 4 | 2 | CH_cav_484 | 2 | 2 | 0.000766695 |
Corchorus olitorius | AWUE01020860.1 | 2 | CH_col_86 | 2 | 2 | 0.000292099 |
Punica granatum | NC_045130.1 | 2 | CH_pgr_328 | 2 | 2 | 0.000450214 |
Quercus lobata | 5 | 2 | CH_qlo_896 | 2 | 2 | 0.000309773 |
Rosa chinensis | RcHm_v2.0_Chr5 | 2 | CH_rch_144 | 6 | 58 | 0.0000000000841949 |
Selenicereus undatus | Scaffold_33678 | 2 | CH_sun_284 | 2 | 2 | 0.000726639 |
Theobroma cacao | Chromosome_6 | 2 | CH_tca_148 | 3 | 3 | 0.0000000804614 |
Trifolium pratense | Tp57577_TGAC_v2_LG4 | 2 | CH_tpr_414 | 2 | 2 | 0.000756974 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |