Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.exocytic trafficking.Exocyst complex.component SEC6

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_117 1 CH_aag_139 2 2 0.00024077
Cicer arietinum L. Ca_LG6_v3 1 CH_car_23 3 3 0.00000000908664
Corylus avellana 5 1 CH_cav_147 3 7 0.00000123414
Citrus clementina scaffold_5 1 CH_ccl_327 2 2 0.0000820311
Ceratophyllum demersum 4 1 CH_cde_240 2 2 0.000473878
Cardamine hirsuta NSCAFB.269 1 CH_chi_90 3 3 0.0000000071667
Carya illinoinensis Chr15 1 CH_cil_365 2 2 0.0000619828
Chenopodium quinoa C_Quinoa_Scaffold_1125 1 CH_cqu_376 2 2 0.000142146
Erythranthe guttata scaffold_3 1 CH_egut_254 3 29 0.0000290337
Glycine max Gm03 1 CH_gma_78 4 9 0.000000000103334
Helianthus annuus HanXRQChr10 1 CH_han_622 2 3 0.000347775
Lonicera japonica GWHAAZE00000004 1 CH_lonja_396 2 2 0.0000598874
Magnolia biondii Chr02 1 CH_mbi_243 3 8 0.00000396109
Magnolia biondii Chr05 1 CH_mbi_312 3 17 0.0000480648
Quercus lobata CM012294 1 CH_qlo_977 2 2 0.000516289
Quercus lobata 5 1 CH_qlo_978 2 2 0.000516289
Rosa chinensis RcHm_v2.0_Chr1 1 CH_rch_103 4 4 0.000000000000950388
Sequoiadendron giganteum chr11 1 CH_sgi_454 3 3 0.0000000142393
Sapria himalayana scaffold9_16683904 1 CH_shi_115 2 2 0.0000571804
Tripterygium wilfordii NC_052254.1 1 CH_twi_240 2 4 0.000334485
Vaccinium macrocarpon chr8_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_335 2 2 0.000278772
Vigna mungo CM024078.1 1 CH_vmu_216 2 2 0.0000646141
Anthoceros agrestis Sc2ySwM_117 2 CH_aag_139 2 2 0.00024077
Cicer arietinum L. Ca_LG6_v3 2 CH_car_23 3 3 0.00000000908664
Corylus avellana 5 2 CH_cav_147 3 7 0.00000123414
Citrus clementina scaffold_5 2 CH_ccl_327 2 2 0.0000820311
Ceratophyllum demersum 4 2 CH_cde_240 2 2 0.000473878
Cardamine hirsuta NSCAFB.269 2 CH_chi_90 3 3 0.0000000071667
Carya illinoinensis Chr15 2 CH_cil_365 2 2 0.0000619828
Chenopodium quinoa C_Quinoa_Scaffold_1125 2 CH_cqu_376 2 2 0.000142146
Erythranthe guttata scaffold_3 2 CH_egut_254 3 29 0.0000290337
Glycine max Gm03 2 CH_gma_78 4 9 0.000000000103334
Helianthus annuus HanXRQChr10 2 CH_han_622 2 3 0.000347775
Lonicera japonica GWHAAZE00000004 2 CH_lonja_396 2 2 0.0000598874
Magnolia biondii Chr02 2 CH_mbi_243 3 8 0.00000396109
Magnolia biondii Chr05 2 CH_mbi_312 3 17 0.0000480648
Quercus lobata CM012294 2 CH_qlo_977 2 2 0.000516289
Quercus lobata 5 2 CH_qlo_978 2 2 0.000516289
Rosa chinensis RcHm_v2.0_Chr1 2 CH_rch_103 4 4 0.000000000000950388
Sequoiadendron giganteum chr11 2 CH_sgi_454 3 3 0.0000000142393
Sapria himalayana scaffold9_16683904 2 CH_shi_115 2 2 0.0000571804
Tripterygium wilfordii NC_052254.1 2 CH_twi_240 2 4 0.000334485
Vaccinium macrocarpon chr8_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_335 2 2 0.000278772
Vigna mungo CM024078.1 2 CH_vmu_216 2 2 0.0000646141

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001