Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.endocytic trafficking.ubiquitylated cargo adaptation.cargo deubiquitination.deubiquitinase (AMSH)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_369 1 CH_aag_101 2 2 0.0000802568
Acer truncatum chr9 1 CH_acertr_496 2 2 0.000422982
Brassica rapa A01 1 CH_bra_353 2 2 0.00064397
Citrullus lanatus CG_Chr04 1 CH_cla_169 2 2 0.000266134
Carica papaya supercontig_3 1 CH_cpa_341 2 2 0.000570396
Lupinus albus Lalb_Chr07 1 CH_lal_359 2 2 0.000524824
Magnolia biondii Chr19 1 CH_mbi_192 4 28 0.000000491372
Sequoiadendron giganteum chr4 1 CH_sgi_1097 2 2 0.000146145
Anthoceros agrestis Sc2ySwM_369 2 CH_aag_101 2 2 0.0000802568
Acer truncatum chr9 2 CH_acertr_496 2 2 0.000422982
Brassica rapa A01 2 CH_bra_353 2 2 0.00064397
Citrullus lanatus CG_Chr04 2 CH_cla_169 2 2 0.000266134
Carica papaya supercontig_3 2 CH_cpa_341 2 2 0.000570396
Lupinus albus Lalb_Chr07 2 CH_lal_359 2 2 0.000524824
Magnolia biondii Chr19 2 CH_mbi_192 4 28 0.000000491372
Sequoiadendron giganteum chr4 2 CH_sgi_1097 2 2 0.000146145

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001