Functional clusters
Information
- Type MapMan
- Description Vesicle trafficking.endocytic trafficking.Retromer-mediated protein recycling.BLOC-1 regulatory complex.component BLOS2
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Hydrangea macrophylla | Hma1.2p1_0304F.1 | 1 | CH_hma_225 | 2 | 2 | 0.000111086 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 1 | CH_lsa_435 | 2 | 4 | 0.000308388 |
| Pisum sativum | chr5LG3 | 1 | CH_psa_260 | 3 | 39 | 0.000148964 |
| Hydrangea macrophylla | Hma1.2p1_0304F.1 | 2 | CH_hma_225 | 2 | 2 | 0.000111086 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 2 | CH_lsa_435 | 2 | 4 | 0.000308388 |
| Pisum sativum | chr5LG3 | 2 | CH_psa_260 | 3 | 39 | 0.000148964 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |