Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.endocytic trafficking.ESCRT-mediated sorting.ESCRT-III complex.associated component FREE1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Avicennia marina ScioBoG_102835_HRSCAF_103059 1 CH_ama_89 2 8 0.000258665
Erigeron canadensis Conyza_canadensis_scaffold:6 1 CH_eca_352 2 2 0.000134617
Salix brachista GWHAAZH00000002 1 CH_sbr_333 2 2 0.000378084
Salix brachista GWHAAZH00000005 1 CH_sbr_334 2 2 0.000378084
Vanilla planifolia CM028155.1 1 CH_vpl_321 2 2 0.000443328
Vitis vinifera chr4 1 CH_vvi_410 2 3 0.000684523
Avicennia marina ScioBoG_102835_HRSCAF_103059 2 CH_ama_89 2 8 0.000258665
Erigeron canadensis Conyza_canadensis_scaffold:6 2 CH_eca_352 2 2 0.000134617
Eucalyptus grandis Chr06 2 CH_egr_519 3 12 0.00000113014
Salix brachista GWHAAZH00000002 2 CH_sbr_333 2 2 0.000378084
Salix brachista GWHAAZH00000005 2 CH_sbr_334 2 2 0.000378084
Vanilla planifolia CM028155.1 2 CH_vpl_321 2 2 0.000443328
Vitis vinifera chr4 2 CH_vvi_410 2 3 0.000684523

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001