Functional clusters
Information
- Type MapMan
- Description Vesicle trafficking.endocytic trafficking.ESCRT-mediated sorting.ESCRT-III complex.component VPS32/SNF7
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Brassica napus | C04 | 1 | CH_bna_256 | 3 | 4 | 0.000000590534 |
Cicer arietinum L. | Ca_LG6_v3 | 1 | CH_car_224 | 2 | 2 | 0.00023349 |
Eucalyptus grandis | Chr03 | 1 | CH_egr_258 | 4 | 6 | 0.000000000045108 |
Fragaria vesca | Fvb4 | 1 | CH_fve_395 | 2 | 2 | 0.000353461 |
Lonicera japonica | GWHAAZE00000004 | 1 | CH_lonja_540 | 2 | 2 | 0.000359324 |
Medicago truncatula | chr8 | 1 | CH_mtr_611 | 2 | 3 | 0.000123259 |
Punica granatum | NC_045130.1 | 1 | CH_pgr_347 | 2 | 3 | 0.000675279 |
Pisum sativum | chr7LG7 | 1 | CH_psa_283 | 2 | 2 | 0.00015649 |
Papaver somniferum | NC_039359.1 | 1 | CH_pso_269 | 3 | 4 | 0.000000255665 |
Papaver somniferum | NC_039359.1 | 1 | CH_pso_700 | 2 | 2 | 0.000810838 |
Rosa chinensis | RcHm_v2.0_Chr7 | 1 | CH_rch_281 | 3 | 4 | 0.0000001907 |
Sequoiadendron giganteum | HRSCAF_1 | 1 | CH_sgi_1225 | 2 | 3 | 0.000292291 |
Tripterygium wilfordii | NC_052235.1 | 1 | CH_twi_247 | 2 | 2 | 0.000334504 |
Cicer arietinum L. | Ca_LG6_v3 | 2 | CH_car_224 | 2 | 2 | 0.00023349 |
Eucalyptus grandis | Chr03 | 2 | CH_egr_258 | 4 | 6 | 0.000000000045108 |
Fragaria vesca | Fvb4 | 2 | CH_fve_395 | 2 | 2 | 0.000353461 |
Lonicera japonica | GWHAAZE00000004 | 2 | CH_lonja_540 | 2 | 2 | 0.000359324 |
Punica granatum | NC_045130.1 | 2 | CH_pgr_347 | 2 | 3 | 0.000675279 |
Pisum sativum | chr7LG7 | 2 | CH_psa_283 | 2 | 2 | 0.00015649 |
Papaver somniferum | NC_039359.1 | 2 | CH_pso_269 | 3 | 4 | 0.000000255665 |
Papaver somniferum | NC_039359.1 | 2 | CH_pso_700 | 2 | 2 | 0.000810838 |
Rosa chinensis | RcHm_v2.0_Chr7 | 2 | CH_rch_281 | 3 | 4 | 0.0000001907 |
Sequoiadendron giganteum | HRSCAF_1 | 2 | CH_sgi_1225 | 2 | 3 | 0.000292291 |
Tripterygium wilfordii | NC_052235.1 | 2 | CH_twi_247 | 2 | 2 | 0.000334504 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |