Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.endocytic trafficking.ESCRT-mediated sorting.ESCRT-III complex.component VPS32/SNF7

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica napus C04 1 CH_bna_256 3 4 0.000000590534
Cicer arietinum L. Ca_LG6_v3 1 CH_car_224 2 2 0.00023349
Eucalyptus grandis Chr03 1 CH_egr_258 4 6 0.000000000045108
Fragaria vesca Fvb4 1 CH_fve_395 2 2 0.000353461
Lonicera japonica GWHAAZE00000004 1 CH_lonja_540 2 2 0.000359324
Medicago truncatula chr8 1 CH_mtr_611 2 3 0.000123259
Punica granatum NC_045130.1 1 CH_pgr_347 2 3 0.000675279
Pisum sativum chr7LG7 1 CH_psa_283 2 2 0.00015649
Papaver somniferum NC_039359.1 1 CH_pso_269 3 4 0.000000255665
Papaver somniferum NC_039359.1 1 CH_pso_700 2 2 0.000810838
Rosa chinensis RcHm_v2.0_Chr7 1 CH_rch_281 3 4 0.0000001907
Sequoiadendron giganteum HRSCAF_1 1 CH_sgi_1225 2 3 0.000292291
Tripterygium wilfordii NC_052235.1 1 CH_twi_247 2 2 0.000334504
Cicer arietinum L. Ca_LG6_v3 2 CH_car_224 2 2 0.00023349
Eucalyptus grandis Chr03 2 CH_egr_258 4 6 0.000000000045108
Fragaria vesca Fvb4 2 CH_fve_395 2 2 0.000353461
Lonicera japonica GWHAAZE00000004 2 CH_lonja_540 2 2 0.000359324
Punica granatum NC_045130.1 2 CH_pgr_347 2 3 0.000675279
Pisum sativum chr7LG7 2 CH_psa_283 2 2 0.00015649
Papaver somniferum NC_039359.1 2 CH_pso_269 3 4 0.000000255665
Papaver somniferum NC_039359.1 2 CH_pso_700 2 2 0.000810838
Rosa chinensis RcHm_v2.0_Chr7 2 CH_rch_281 3 4 0.0000001907
Sequoiadendron giganteum HRSCAF_1 2 CH_sgi_1225 2 3 0.000292291
Tripterygium wilfordii NC_052235.1 2 CH_twi_247 2 2 0.000334504

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001