Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.endocytic trafficking.ESCRT-mediated sorting.ESCRT-II complex.component VPS36

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00119 1 CH_atr_184 2 2 0.0000794407
Capsicum annuum PGAv.1.6.scaffold134 1 CH_can_320 2 3 0.000247821
Carica papaya supercontig_54 1 CH_cpa_272 2 3 0.000285185
Gossypium raimondii Chr13 1 CH_gra_391 2 3 0.000482475
Hydrangea macrophylla Hma1.2p1_0327F.1 1 CH_hma_38 3 3 0.0000000185113
Nelumbo nucifera chr2 1 CH_nnu_277 2 2 0.0000436015
Sequoiadendron giganteum chr2 1 CH_sgi_856 2 2 0.0000487151
Vigna mungo CM024076.1 1 CH_vmu_196 2 2 0.0000646141
Amborella trichopoda AmTr_v1.0_scaffold00119 2 CH_atr_184 2 2 0.0000794407
Capsicum annuum PGAv.1.6.scaffold134 2 CH_can_320 2 3 0.000247821
Carica papaya supercontig_54 2 CH_cpa_272 2 3 0.000285185
Gossypium raimondii Chr13 2 CH_gra_391 2 3 0.000482475
Hydrangea macrophylla Hma1.2p1_0327F.1 2 CH_hma_38 3 3 0.0000000185113
Nelumbo nucifera chr2 2 CH_nnu_277 2 2 0.0000436015
Sequoiadendron giganteum chr2 2 CH_sgi_856 2 2 0.0000487151
Vigna mungo CM024076.1 2 CH_vmu_196 2 2 0.0000646141

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001