Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.post-Golgi trafficking.target membrane fusion.membrane fusion complexes.Qa-type SNARE components.SYP3-group component

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cicer arietinum L. Ca_LG5_v3 1 CH_car_145 2 2 0.0000778301
Coffea canephora chr6 1 CH_ccan_209 2 6 0.0000638831
Glycine max Gm04 1 CH_gma_493 2 2 0.000379557
Glycine max Gm06 1 CH_gma_494 2 2 0.000379557
Malus domestica Chr15 1 CH_mdo_544 2 2 0.000227527
Nelumbo nucifera chr8 1 CH_nnu_358 2 2 0.000261609
Phaseolus vulgaris Chr09 1 CH_pvu_341 2 2 0.000220418
Sequoiadendron giganteum chr9 1 CH_sgi_1299 2 2 0.000487151
Sequoiadendron giganteum chr6 1 CH_sgi_1300 2 2 0.000487151
Theobroma cacao Chromosome_9 1 CH_tca_335 2 2 0.000219716
Trifolium pratense Tp57577_TGAC_v2_LG7 1 CH_tpr_349 2 4 0.00045415
Tripterygium wilfordii NC_052240.1 1 CH_twi_207 2 2 0.000167252
Vigna mungo CM024072.1 1 CH_vmu_278 2 2 0.000193842
Vanilla planifolia CM028158.1 1 CH_vpl_133 3 35 0.0000535366
Cicer arietinum L. Ca_LG5_v3 2 CH_car_145 2 2 0.0000778301
Coffea canephora chr6 2 CH_ccan_209 2 6 0.0000638831
Eucalyptus grandis Chr03 2 CH_egr_492 3 6 0.000000411004
Glycine max Gm04 2 CH_gma_493 2 2 0.000379557
Glycine max Gm06 2 CH_gma_494 2 2 0.000379557
Lotus japonicus chr1 2 CH_lja_313 2 2 0.000214523
Malus domestica Chr15 2 CH_mdo_544 2 2 0.000227527
Nelumbo nucifera chr8 2 CH_nnu_358 2 2 0.000261609
Phaseolus vulgaris Chr09 2 CH_pvu_341 2 2 0.000220418
Sequoiadendron giganteum chr9 2 CH_sgi_1299 2 2 0.000487151
Sequoiadendron giganteum chr6 2 CH_sgi_1300 2 2 0.000487151
Theobroma cacao Chromosome_9 2 CH_tca_335 2 2 0.000219716
Trifolium pratense Tp57577_TGAC_v2_LG7 2 CH_tpr_349 2 4 0.00045415
Tripterygium wilfordii NC_052240.1 2 CH_twi_207 2 2 0.000167252
Vigna mungo CM024072.1 2 CH_vmu_278 2 2 0.000193842
Vanilla planifolia CM028158.1 2 CH_vpl_133 3 35 0.0000535366

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001