Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.post-Golgi trafficking.vesicle tethering.HOPS/CORVET tethering complexes.CORVET-specific component VPS8

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Capsicum annuum PGAv.1.6.scaffold929 1 CH_can_95 3 3 0.0000000102372
Carica papaya supercontig_193 1 CH_cpa_379 2 5 0.000950525
Helianthus annuus HanXRQChr11 1 CH_han_506 2 2 0.000115929
Hydrangea macrophylla Hma1.2p1_0074F.1 1 CH_hma_37 3 3 0.0000000185113
Sequoiadendron giganteum chr3 1 CH_sgi_442 3 4 0.000000014239
Trochodendron aralioides group0 1 CH_tar_349 2 2 0.00018011
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_238 2 2 0.0000929238
Vanilla planifolia CM028156.1 1 CH_vpl_172 2 2 0.000073888
Capsicum annuum PGAv.1.6.scaffold929 2 CH_can_95 3 3 0.0000000102372
Carica papaya supercontig_193 2 CH_cpa_379 2 5 0.000950525
Helianthus annuus HanXRQChr11 2 CH_han_506 2 2 0.000115929
Hydrangea macrophylla Hma1.2p1_0074F.1 2 CH_hma_37 3 3 0.0000000185113
Sequoiadendron giganteum chr3 2 CH_sgi_442 3 4 0.000000014239
Trochodendron aralioides group0 2 CH_tar_349 2 2 0.00018011
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_238 2 2 0.0000929238
Vanilla planifolia CM028156.1 2 CH_vpl_172 2 2 0.000073888

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001