Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.post-Golgi trafficking.vesicle tethering.HOPS/CORVET tethering complexes.HOPS-specific component VPS39

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica oleracea C3 1 CH_bol_275 2 2 0.0000980584
Cucumis sativus L. chr4 1 CH_csa_94 3 3 0.0000000418111
Olea europaea chr17 1 CH_oeu_234 2 2 0.000160137
Rosa chinensis RcHm_v2.0_Chr2 1 CH_rch_504 3 49 0.0000438808
Sequoiadendron giganteum chr3 1 CH_sgi_855 2 2 0.0000487151
Sapria himalayana scaffold94_1542895 1 CH_shi_9 4 5 0.00000000000280452
Theobroma cacao Chromosome_1 1 CH_tca_346 2 2 0.000219716
Trifolium pratense Tp57577_TGAC_v2_scaf_423 1 CH_tpr_37 4 7 0.000000000683036
Vanilla planifolia CM028150.1 1 CH_vpl_171 2 2 0.000073888
Brassica oleracea C3 2 CH_bol_275 2 2 0.0000980584
Cucumis sativus L. chr4 2 CH_csa_94 3 3 0.0000000418111
Olea europaea chr17 2 CH_oeu_234 2 2 0.000160137
Rosa chinensis RcHm_v2.0_Chr2 2 CH_rch_504 3 49 0.0000438808
Sequoiadendron giganteum chr3 2 CH_sgi_855 2 2 0.0000487151
Sapria himalayana scaffold94_1542895 2 CH_shi_9 4 5 0.00000000000280452
Theobroma cacao Chromosome_1 2 CH_tca_346 2 2 0.000219716
Trifolium pratense Tp57577_TGAC_v2_scaf_423 2 CH_tpr_37 4 7 0.000000000683036
Vanilla planifolia CM028150.1 2 CH_vpl_171 2 2 0.000073888

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001