Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.post-Golgi trafficking.vesicle tethering.HOPS/CORVET tethering complexes.component VPS18

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Avicennia marina ScioBoG_14204_HRSCAF_14270 1 CH_ama_52 2 2 0.0000862218
Camellia sinensis var. sinensis Chr9 1 CH_camsi_468 3 9 0.000014827
Camellia sinensis var. sinensis Chr13 1 CH_camsi_503 4 80 0.0000317916
Chara braunii BFEA01000539 1 CH_cbr_92 2 3 0.000215773
Carica papaya supercontig_34 1 CH_cpa_210 2 2 0.0000950661
Davidia involucrata GWHABJS00000001 1 CH_din_257 2 2 0.0000500125
Hydrangea macrophylla Hma1.2p1_0565F.1 1 CH_hma_224 2 2 0.000111086
Lonicera japonica GWHAAZE00000001 1 CH_lonja_463 2 2 0.000179662
Medicago truncatula chr8 1 CH_mtr_610 2 2 0.000123259
Nicotiana tabacum Nitab4.5_0000025 1 CH_nta_24 3 3 0.0000000180611
Quercus lobata 8 1 CH_qlo_759 2 3 0.000154883
Sequoiadendron giganteum chr10 1 CH_sgi_131 5 5 4.22455e-17
Avicennia marina ScioBoG_14204_HRSCAF_14270 2 CH_ama_52 2 2 0.0000862218
Camellia sinensis var. sinensis Chr9 2 CH_camsi_468 3 9 0.000014827
Camellia sinensis var. sinensis Chr13 2 CH_camsi_503 4 80 0.0000317916
Chara braunii BFEA01000539 2 CH_cbr_92 2 3 0.000215773
Carica papaya supercontig_34 2 CH_cpa_210 2 2 0.0000950661
Davidia involucrata GWHABJS00000001 2 CH_din_257 2 2 0.0000500125
Hydrangea macrophylla Hma1.2p1_0565F.1 2 CH_hma_224 2 2 0.000111086
Lonicera japonica GWHAAZE00000001 2 CH_lonja_463 2 2 0.000179662
Nicotiana tabacum Nitab4.5_0000025 2 CH_nta_24 3 3 0.0000000180611
Quercus lobata 8 2 CH_qlo_759 2 3 0.000154883
Sequoiadendron giganteum chr10 2 CH_sgi_131 5 5 4.22455e-17

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001