Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.post-Golgi trafficking.vesicle tethering.GARP/EARP complexes.component VPS53/HIT1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_1 1 CH_aly_337 3 59 0.000212057
Citrus clementina scaffold_8 1 CH_ccl_372 2 3 0.000246083
Lupinus albus Lalb_Chr15 1 CH_lal_265 2 2 0.000157447
Sequoiadendron giganteum chr1 1 CH_sgi_1311 2 2 0.000487151
Sequoiadendron giganteum chr1 1 CH_sgi_533 3 4 0.000000142385
Sapria himalayana scaffold37_5694058 1 CH_shi_195 2 4 0.000343063
Solanum tuberosum ST4.03ch04 1 CH_stu_383 2 2 0.0000512453
Arabidopsis lyrata scaffold_1 2 CH_aly_337 3 59 0.000212057
Citrus clementina scaffold_8 2 CH_ccl_372 2 3 0.000246083
Lupinus albus Lalb_Chr15 2 CH_lal_265 2 2 0.000157447
Sequoiadendron giganteum chr1 2 CH_sgi_1311 2 2 0.000487151
Sequoiadendron giganteum chr1 2 CH_sgi_533 3 4 0.000000142385
Sapria himalayana scaffold37_5694058 2 CH_shi_195 2 4 0.000343063
Solanum tuberosum ST4.03ch04 2 CH_stu_383 2 2 0.0000512453

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001