Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.post-Golgi trafficking.vesicle tethering.TRAPP-III-complex-specific components.component TRAPPC8/TRS85

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_7 1 CH_amhyb_137 2 2 0.0000841751
Corylus avellana 10 1 CH_cav_253 2 2 0.0000766695
Carica papaya supercontig_104 1 CH_cpa_271 2 3 0.000285185
Glycine max Gm19 1 CH_gma_575 2 4 0.000683159
Lonicera japonica GWHAAZE00000001 1 CH_lonja_376 2 2 0.0000598874
Sequoiadendron giganteum chr7 1 CH_sgi_250 4 4 0.00000000000173426
Sapria himalayana scaffold9_16683904 1 CH_shi_48 3 10 0.000000588427
Amaranthus hybridus AmaHy_arrow1_Scaffold_7 2 CH_amhyb_137 2 2 0.0000841751
Corylus avellana 10 2 CH_cav_253 2 2 0.0000766695
Carica papaya supercontig_104 2 CH_cpa_271 2 3 0.000285185
Gossypium hirsutum A04 2 CH_ghi_689 2 2 0.000400523
Gossypium hirsutum D04 2 CH_ghi_690 2 2 0.000400523
Glycine max Gm19 2 CH_gma_575 2 4 0.000683159
Lonicera japonica GWHAAZE00000001 2 CH_lonja_376 2 2 0.0000598874
Sequoiadendron giganteum chr7 2 CH_sgi_250 4 4 0.00000000000173426
Sapria himalayana scaffold9_16683904 2 CH_shi_48 3 10 0.000000588427

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001