Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.post-Golgi trafficking.vesicle tethering.TRAPP-II complex-specific components.component TRS120/VAN4

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Hydrangea macrophylla Hma1.2p1_0167F.1 1 CH_hma_222 2 2 0.000111086
Sequoiadendron giganteum chr11 1 CH_sgi_851 2 2 0.0000487151
Trifolium pratense Tp57577_TGAC_v2_LG1 1 CH_tpr_228 2 2 0.0000756974
Utricularia gibba unitig_32 1 CH_ugi_158 2 2 0.0000734592
Vanilla planifolia CM028162.1 1 CH_vpl_263 2 2 0.000221664
Zea mays 10 1 CH_zma_193 2 2 0.000153394
Gossypium hirsutum D07 2 CH_ghi_620 2 2 0.000267016
Hydrangea macrophylla Hma1.2p1_0167F.1 2 CH_hma_222 2 2 0.000111086
Sequoiadendron giganteum chr11 2 CH_sgi_851 2 2 0.0000487151
Trifolium pratense Tp57577_TGAC_v2_LG1 2 CH_tpr_228 2 2 0.0000756974
Utricularia gibba unitig_32 2 CH_ugi_158 2 2 0.0000734592
Vanilla planifolia CM028162.1 2 CH_vpl_263 2 2 0.000221664
Zea mays 10 2 CH_zma_193 2 2 0.000153394

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001