Functional clusters
Information
- Type MapMan
- Description Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase membrane association.RAB-GDI displacement factor (GDF) activities.B-G-class Rab-GDF protein
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Actinidia chinensis | Lachesis_group19 | 1 | CH_ach_26 | 4 | 7 | 0.0000000229573 |
| Brassica carinata | ChrB04 | 1 | CH_bca_129 | 4 | 4 | 0.00000000153441 |
| Brassica carinata | ChrC09 | 1 | CH_bca_430 | 3 | 3 | 0.00000448617 |
| Brassica napus | A01 | 1 | CH_bna_342 | 3 | 3 | 0.00000637094 |
| Brassica napus | C01 | 1 | CH_bna_343 | 3 | 3 | 0.00000637094 |
| Brassica oleracea | C1 | 1 | CH_bol_155 | 3 | 3 | 0.00000246801 |
| Brassica rapa | A01 | 1 | CH_bra_141 | 3 | 3 | 0.00000367707 |
| Actinidia chinensis | Lachesis_group19 | 2 | CH_ach_26 | 4 | 7 | 0.0000000229573 |
| Brassica carinata | ChrB04 | 2 | CH_bca_129 | 4 | 4 | 0.00000000153441 |
| Brassica carinata | ChrC09 | 2 | CH_bca_430 | 3 | 3 | 0.00000448617 |
| Brassica oleracea | C1 | 2 | CH_bol_155 | 3 | 3 | 0.00000246801 |
| Brassica rapa | A01 | 2 | CH_bra_141 | 3 | 3 | 0.00000367707 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |