Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase membrane association.RAB-GTPase GDP-dissociation inhibitor (RAB-GDI)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Avicennia marina ScioBoG_4088_HRSCAF_4107 1 CH_ama_137 2 3 0.00077594
Magnolia biondii Chr16 1 CH_mbi_165 3 4 0.000000141515
Manihot esculenta Chromosome07 1 CH_mes_437 3 25 0.000449046
Punica granatum NC_045130.1 1 CH_pgr_125 3 5 0.000000337789
Rhododendron simsii chr09 1 CH_rsi_432 2 2 0.000193592
Simmondsia chinensis GWHAASQ00000025 1 CH_sci_220 2 2 0.000255428
Avicennia marina ScioBoG_4088_HRSCAF_4107 2 CH_ama_137 2 3 0.00077594
Magnolia biondii Chr16 2 CH_mbi_165 3 4 0.000000141515
Manihot esculenta Chromosome07 2 CH_mes_437 3 25 0.000449046
Punica granatum NC_045130.1 2 CH_pgr_125 3 5 0.000000337789
Rhododendron simsii chr09 2 CH_rsi_432 2 2 0.000193592
Simmondsia chinensis GWHAASQ00000025 2 CH_sci_220 2 2 0.000255428

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001