Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.post-Golgi trafficking.vacuolar protein sorting.regulatory factor (COV1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr4 1 CH_acertr_505 2 2 0.000422982
Arabidopsis thaliana Chr2 1 CH_ath_388 2 3 0.000515668
Cicer arietinum L. Ca_LG6_v3 1 CH_car_276 2 2 0.000466981
Coffea canephora chr7 1 CH_ccan_285 2 6 0.000255531
Helianthus annuus HanXRQChr11 1 CH_han_736 2 2 0.0008115
Physcomitrium patens Chr10 1 CH_ppa_249 2 2 0.000367636
Physcomitrium patens Chr14 1 CH_ppa_250 2 2 0.000367636
Phaseolus vulgaris Chr04 1 CH_pvu_423 2 2 0.000440836
Quercus lobata CM012294 1 CH_qlo_444 4 35 0.000000323609
Sequoiadendron giganteum chr4 1 CH_sgi_918 2 2 0.0000487151
Sapria himalayana scaffold5_19632047 1 CH_shi_114 2 2 0.0000571804
Trifolium pratense Tp57577_TGAC_v2_LG3 1 CH_tpr_378 2 2 0.000454184
Vigna mungo CM024077.1 1 CH_vmu_355 2 2 0.000387685
Acer truncatum chr4 2 CH_acertr_505 2 2 0.000422982
Arabidopsis thaliana Chr2 2 CH_ath_388 2 3 0.000515668
Cicer arietinum L. Ca_LG6_v3 2 CH_car_276 2 2 0.000466981
Coffea canephora chr7 2 CH_ccan_285 2 6 0.000255531
Helianthus annuus HanXRQChr11 2 CH_han_736 2 2 0.0008115
Physcomitrium patens Chr10 2 CH_ppa_249 2 2 0.000367636
Physcomitrium patens Chr14 2 CH_ppa_250 2 2 0.000367636
Phaseolus vulgaris Chr04 2 CH_pvu_423 2 2 0.000440836
Quercus lobata CM012294 2 CH_qlo_444 4 35 0.000000323609
Sequoiadendron giganteum chr4 2 CH_sgi_918 2 2 0.0000487151
Sapria himalayana scaffold5_19632047 2 CH_shi_114 2 2 0.0000571804
Trifolium pratense Tp57577_TGAC_v2_LG3 2 CH_tpr_378 2 2 0.000454184
Vigna mungo CM024077.1 2 CH_vmu_355 2 2 0.000387685

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001