Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.post-Golgi trafficking.vacuolar protein sorting.lytic vacuole sorting receptor (VSR)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cannabis sativa NC_044370.1 1 CH_cansat_307 2 2 0.000196993
Citrullus lanatus CG_Chr02 1 CH_cla_226 2 2 0.000887115
Magnolia biondii Chr15 1 CH_mbi_534 2 2 0.000291397
Sequoiadendron giganteum chr6 1 CH_sgi_1326 2 2 0.000487151
Sequoiadendron giganteum chr10 1 CH_sgi_1327 2 2 0.000487151
Schrenkiella parvula ch3-5 1 CH_spa_197 3 12 0.000171509
Cannabis sativa NC_044370.1 2 CH_cansat_307 2 2 0.000196993
Citrullus lanatus CG_Chr02 2 CH_cla_226 2 2 0.000887115
Magnolia biondii Chr15 2 CH_mbi_534 2 2 0.000291397
Sequoiadendron giganteum chr6 2 CH_sgi_1326 2 2 0.000487151
Sequoiadendron giganteum chr10 2 CH_sgi_1327 2 2 0.000487151
Schrenkiella parvula ch3-5 2 CH_spa_197 3 12 0.000171509

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001