Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.post-Golgi trafficking.coat protein recruiting.ARF-GTPase activation.class I ARF-GAP protein

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica napus C03 1 CH_bna_517 3 17 0.000127627
Carica papaya supercontig_2 1 CH_cpa_386 2 2 0.000950661
Carica papaya supercontig_13 1 CH_cpa_387 2 2 0.000950661
Nicotiana tabacum Nitab4.5_0000129 1 CH_nta_162 2 2 0.000658364
Olea europaea chr8 1 CH_oeu_352 2 3 0.000480389
Quercus lobata 10 1 CH_qlo_1034 2 4 0.00092924
Sequoiadendron giganteum chr4 1 CH_sgi_1096 2 2 0.000146145
Vanilla planifolia CM028152.1 1 CH_vpl_262 2 2 0.000221664
Carica papaya supercontig_2 2 CH_cpa_386 2 2 0.000950661
Carica papaya supercontig_13 2 CH_cpa_387 2 2 0.000950661
Nicotiana tabacum Nitab4.5_0000129 2 CH_nta_162 2 2 0.000658364
Olea europaea chr8 2 CH_oeu_352 2 3 0.000480389
Quercus lobata 10 2 CH_qlo_1034 2 4 0.00092924
Sequoiadendron giganteum chr4 2 CH_sgi_1096 2 2 0.000146145
Vanilla planifolia CM028152.1 2 CH_vpl_262 2 2 0.000221664

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001