Functional clusters
Information
- Type MapMan
- Description Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.CCV accessory factor activities.clathrin uncoating protein (AUL)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis thaliana | Chr4 | 1 | CH_ath_401 | 2 | 2 | 0.000601633 |
| Eutrema salsugineum | scaffold_1 | 1 | CH_esa_101 | 3 | 3 | 0.000000487118 |
| Sapria himalayana | scaffold9_16683904 | 1 | CH_shi_49 | 3 | 7 | 0.000000686499 |
| Vitis vinifera | chrUn | 1 | CH_vvi_237 | 3 | 5 | 0.0000315682 |
| Vitis vinifera | chr7 | 1 | CH_vvi_238 | 3 | 5 | 0.0000315682 |
| Arabidopsis thaliana | Chr4 | 2 | CH_ath_401 | 2 | 2 | 0.000601633 |
| Eutrema salsugineum | scaffold_1 | 2 | CH_esa_101 | 3 | 3 | 0.000000487118 |
| Sapria himalayana | scaffold9_16683904 | 2 | CH_shi_49 | 3 | 7 | 0.000000686499 |
| Vitis vinifera | chrUn | 2 | CH_vvi_237 | 3 | 5 | 0.0000315682 |
| Vitis vinifera | chr7 | 2 | CH_vvi_238 | 3 | 5 | 0.0000315682 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |