Functional clusters
Information
- Type MapMan
- Description Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.AP-3 cargo adaptor complex.large subunit beta (AP3B)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Camellia sinensis var. sinensis | Chr7 | 1 | CH_camsi_803 | 2 | 5 | 0.000458516 |
Lonicera japonica | GWHAAZE00000008 | 1 | CH_lonja_374 | 2 | 2 | 0.0000598874 |
Magnolia biondii | Chr14 | 1 | CH_mbi_508 | 2 | 4 | 0.000291382 |
Nicotiana tabacum | Nitab4.5_0000005 | 1 | CH_nta_103 | 2 | 2 | 0.000109727 |
Physcomitrium patens | Chr08 | 1 | CH_ppa_89 | 2 | 2 | 0.0000612726 |
Selaginella moellendorffii | scaffold_57 | 1 | CH_smo_40 | 3 | 9 | 0.00000109822 |
Camellia sinensis var. sinensis | Chr7 | 2 | CH_camsi_803 | 2 | 5 | 0.000458516 |
Lonicera japonica | GWHAAZE00000008 | 2 | CH_lonja_374 | 2 | 2 | 0.0000598874 |
Magnolia biondii | Chr14 | 2 | CH_mbi_508 | 2 | 4 | 0.000291382 |
Nicotiana tabacum | Nitab4.5_0000005 | 2 | CH_nta_103 | 2 | 2 | 0.000109727 |
Physcomitrium patens | Chr08 | 2 | CH_ppa_89 | 2 | 2 | 0.0000612726 |
Selaginella moellendorffii | scaffold_57 | 2 | CH_smo_40 | 3 | 9 | 0.00000109822 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |