Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.Golgi-ER retrograde trafficking.vesicle tethering.COG tethering complex.component COG5

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr6 1 CH_acertr_300 2 2 0.000070497
Actinidia chinensis Lachesis_group19 1 CH_ach_88 2 2 0.0000543213
Brassica carinata ChrB01 1 CH_bca_857 2 2 0.000320646
Camellia sinensis var. sinensis Chr5 1 CH_camsi_73 5 18 0.000000000000284058
Corylus avellana 5 1 CH_cav_397 2 4 0.000459982
Carica papaya supercontig_2 1 CH_cpa_330 2 4 0.000570342
Magnolia biondii Chr10 1 CH_mbi_663 2 4 0.000874119
Acer truncatum chr6 2 CH_acertr_300 2 2 0.000070497
Actinidia chinensis Lachesis_group19 2 CH_ach_88 2 2 0.0000543213
Brassica carinata ChrB01 2 CH_bca_857 2 2 0.000320646
Camellia sinensis var. sinensis Chr5 2 CH_camsi_73 5 18 0.000000000000284058
Corylus avellana 5 2 CH_cav_397 2 4 0.000459982
Carica papaya supercontig_2 2 CH_cpa_330 2 4 0.000570342
Magnolia biondii Chr10 2 CH_mbi_663 2 4 0.000874119

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001