Functional clusters
Information
- Type MapMan
- Description Vesicle trafficking.Golgi-ER retrograde trafficking.protein cargo receptor activities.cargo receptor (ERV-A)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Anthoceros agrestis | Sc2ySwM_344 | 1 | CH_aag_108 | 2 | 2 | 0.0000802568 |
Coffea canephora | chr10 | 1 | CH_ccan_284 | 2 | 6 | 0.000255531 |
Prasinoderma coloniale | Chr7 | 1 | CH_pco_8 | 2 | 2 | 0.000279135 |
Physcomitrium patens | Chr16 | 1 | CH_ppa_302 | 2 | 2 | 0.000612726 |
Pisum sativum | chr2LG1 | 1 | CH_psa_340 | 2 | 2 | 0.000312981 |
Vaccinium macrocarpon | chr10_Vaccinium_macrocarpon_Stevens_v1 | 1 | CH_vma_436 | 2 | 2 | 0.000929238 |
Vaccinium macrocarpon | chr5_Vaccinium_macrocarpon_Stevens_v1 | 1 | CH_vma_437 | 2 | 2 | 0.000929238 |
Anthoceros agrestis | Sc2ySwM_344 | 2 | CH_aag_108 | 2 | 2 | 0.0000802568 |
Coffea canephora | chr10 | 2 | CH_ccan_284 | 2 | 6 | 0.000255531 |
Prasinoderma coloniale | Chr7 | 2 | CH_pco_8 | 2 | 2 | 0.000279135 |
Physcomitrium patens | Chr16 | 2 | CH_ppa_302 | 2 | 2 | 0.000612726 |
Pisum sativum | chr2LG1 | 2 | CH_psa_340 | 2 | 2 | 0.000312981 |
Vaccinium macrocarpon | chr10_Vaccinium_macrocarpon_Stevens_v1 | 2 | CH_vma_436 | 2 | 2 | 0.000929238 |
Vaccinium macrocarpon | chr5_Vaccinium_macrocarpon_Stevens_v1 | 2 | CH_vma_437 | 2 | 2 | 0.000929238 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |