Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.Golgi-ER retrograde trafficking.protein cargo receptor activities.cargo receptor (ERV-A)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_344 1 CH_aag_108 2 2 0.0000802568
Coffea canephora chr10 1 CH_ccan_284 2 6 0.000255531
Prasinoderma coloniale Chr7 1 CH_pco_8 2 2 0.000279135
Physcomitrium patens Chr16 1 CH_ppa_302 2 2 0.000612726
Pisum sativum chr2LG1 1 CH_psa_340 2 2 0.000312981
Vaccinium macrocarpon chr10_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_436 2 2 0.000929238
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_437 2 2 0.000929238
Anthoceros agrestis Sc2ySwM_344 2 CH_aag_108 2 2 0.0000802568
Coffea canephora chr10 2 CH_ccan_284 2 6 0.000255531
Prasinoderma coloniale Chr7 2 CH_pco_8 2 2 0.000279135
Physcomitrium patens Chr16 2 CH_ppa_302 2 2 0.000612726
Pisum sativum chr2LG1 2 CH_psa_340 2 2 0.000312981
Vaccinium macrocarpon chr10_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_436 2 2 0.000929238
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_437 2 2 0.000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001