Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.ER export trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.scaffolding component Sec13

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC01 1 CH_bca_987 2 2 0.00059854
Camellia sinensis var. sinensis Chr2 1 CH_camsi_317 3 4 0.000000441527
Carya illinoinensis Chr12 1 CH_cil_481 2 2 0.000371897
Nelumbo nucifera chr8 1 CH_nnu_364 2 2 0.000261609
Quercus lobata 11 1 CH_qlo_1033 2 4 0.00092924
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_304 2 3 0.000278759
Brassica carinata ChrC01 2 CH_bca_987 2 2 0.00059854
Camellia sinensis var. sinensis Chr2 2 CH_camsi_317 3 4 0.000000441527
Carya illinoinensis Chr12 2 CH_cil_481 2 2 0.000371897
Nelumbo nucifera chr8 2 CH_nnu_364 2 2 0.000261609
Quercus lobata 11 2 CH_qlo_1033 2 4 0.00092924
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_304 2 3 0.000278759

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001